| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1821 |
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| Symbol | miaB |
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| ID | 4183865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2138779 |
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| End bp | 2140224 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638071820 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_678430 |
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| Protein GI | 110638221 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0513029 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAG TTGTTCAAGA CTTAGATGTA CTTCCGGCTG CTCCAACCGC AGCCGAAAAA
GCTGCCTGCG ATTTGCCCCG CATCACCGAG GAACGTAATA CAGGCAAGCA GCGTAAATTA
TATATTGAAA GTTATGGTTG CCAGATGAAT TTCTCTGACA GCGAAATTGT AATGTCTATT
CTTACCGAAG AAGGTTTTGA TACCACATCC ACACCAAACA ACGCAGACGT TATTCTATTA
AACACTTGTT CCATACGTGA TAATGCAGAA CAAAAAGTGC GTCATCGCCT GGTACATTTT
AAGGGCTTAA AAAGAAACAA ACCATCCATG ATTGTTGGCG TGCTCGGCTG TATGGCCGAA
CGCTTGAAAG CACAATTACT GGAAGAAGAA AAAATTGTAG ACATGGTTGT AGGGCCCGAT
GCCTACAGAG ACCTGCCAAA TCTGATAAAC GAAGTTGACA GCGGACATAA AGCGGTAAAC
GTATTTCTTT CCCGTGAAGA AACCTATGCA GATATTAATC CGCTTCGCTT AAGCGGTGAT
GGTGTGTCTG CGTTTGTCTC AATCATGCGG GGCTGCGACA ATATGTGTTC GTTCTGTGTA
GTGCCCTACA CACGAGGCAG AGAACGCAGC CGTGACGCAC ATTCCATCCT GAATGAAGTA
CGGGAGCTGG TAGCAAACGG ATACAAAGAA GTTACCCTGC TGGGTCAGAA TGTTGACTCG
TATAAATGGT CTGCAGAAGG TACCGATGAG CGCGTAAATT TTGCTCAGCT GCTGGAACGC
GTTGCCCTGG TTGATCCAGA CCTTCGCGTA CGATTTTCTA CTTCACACCC GAAAGATATT
ACCGATGAAG TATTGTACAC CATGAAAAAG TACGATAACA TCTGTAACTC TATTCACCTG
CCTGCACAAA GCGGTAATAC GCGTATTCTG GAACTGATGA ACCGCACCTA TACACGCGAA
TGGTACATGG AACGGATCAC AAAAATACGG CAGATCCTGG GTGATGACTG CGGCATATCG
TCGGATACCA TCGCTGGTTT TTGTTCTGAA ACAGAAGAAG AACATCAGGA TACCTTATCA
TTGATGGAGT TTGCGCGCTT TGATTTCGGT TACCAGTTTG TTTACAGCGA ACGGCCGGGT
ACACCTGCTG CCAAGAAGCT TGCAGACGAT GTGCCGGAAG ATGTAAAACA GCGCAGGTTG
TCTGAAATCA TAACGGTACA GAGACAATTA TCGCTGGAAC ATAATCAGGC ACAGATCGGC
ACAATCCAGA AAATACTGAT CGAAGGTGTT TCTAAAAAAT CAGAGCATGA TTTGAAAGGG
AGAAACAGCC GTAACATGAT GGCTATCTTC CCGAAGAAAA ACTACAGCAA AGGCCAGTAT
GTAGATGTAC TGATCACCGG CTGTTCAGGC GGAACGTTAT TCGGAGAAAT CGTGGAGACA
GTGTAG
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| Protein sequence | MKQVVQDLDV LPAAPTAAEK AACDLPRITE ERNTGKQRKL YIESYGCQMN FSDSEIVMSI
LTEEGFDTTS TPNNADVILL NTCSIRDNAE QKVRHRLVHF KGLKRNKPSM IVGVLGCMAE
RLKAQLLEEE KIVDMVVGPD AYRDLPNLIN EVDSGHKAVN VFLSREETYA DINPLRLSGD
GVSAFVSIMR GCDNMCSFCV VPYTRGRERS RDAHSILNEV RELVANGYKE VTLLGQNVDS
YKWSAEGTDE RVNFAQLLER VALVDPDLRV RFSTSHPKDI TDEVLYTMKK YDNICNSIHL
PAQSGNTRIL ELMNRTYTRE WYMERITKIR QILGDDCGIS SDTIAGFCSE TEEEHQDTLS
LMEFARFDFG YQFVYSERPG TPAAKKLADD VPEDVKQRRL SEIITVQRQL SLEHNQAQIG
TIQKILIEGV SKKSEHDLKG RNSRNMMAIF PKKNYSKGQY VDVLITGCSG GTLFGEIVET
V
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