| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1817 |
|---|
| Symbol | |
|---|
| ID | 4185043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 2133592 |
|---|
| End bp | 2134533 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638071816 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_678426 |
|---|
| Protein GI | 110638217 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3781] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.294075 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.846199 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTTA AATTTAGATT TGTTCCTAAA GATGTTTTTG AAGTATCTAA GAACAATATT
ACTTATTCAT TAACAATTGT TTTTTTTGCT GTTGTGCTTA AAGTTACAAA CTACTACAAT
GATTGGGGGG TACCCGTTTC AATTACAGCT GTATTGGGTA CCGCACTATC TATTTTACTT
GGTTTCTCGA ATAGTCAGGC TTACGACCGC TGGTGGGAAG CGCGGAAGAT CTGGGGAAGT
ATTGTAAATG ACAGCCGCTC GTTTGCAAAG CAGGTTATTT CTTTTATTCA GTTTGAAGAT
GACAATCACC ATCACGCAAC AAAGGAGATC CGGAAAAAAA TAATTTACAG ACACCTCGCA
TTTATCAATG CATTAAGAAT GCAGCTGAGA GAAGAATCTG ATGCAGAAAA AATGACTGCT
GCATTGAGCC CGTTTTTATC AGAAGAAGAA TACAATACGG TAAGAGGGTG CAGCAATGTT
GCTACACAGC TTATAAAAAA TCAGGCAGCA GATATACGTA AAATGTACGA TCGTAAATTG
CTGAATGAAT ATATGTTTGT TCAGATGGAT CAAAGCCTGA ACCATTTTTA CACCTATCAG
GGGCAGGCAG AACGGATCAA AAAAACGCCT TTTCTTCCAA CCTATCATTT CTTTTCAAAA
GTGTTCCTGT ATTTTTTTAT TACACTGCTG CCTTTTAGCT TATTATCTGG TGTAGACAAA
GCTGCAACCA CCTGGATGAT GCTGCCTATT ACCGTGCTTA TCGGCTGGGT ATTTCACATG
ATCTATATGA ACGGACATGT ATATGCGTAT CCGTTTGATA ATACACCGTT TGATACGCCT
ATGACTGCGA TTTGCAATAC CATAGAAATT GATTTAAAGG AGATGATTGG TGATGATTCT
ATCCCGGTGA AAATGACCCC CACCAGAGGT ATTCTGATGT AA
|
|---|
| Protein sequence | MIVKFRFVPK DVFEVSKNNI TYSLTIVFFA VVLKVTNYYN DWGVPVSITA VLGTALSILL
GFSNSQAYDR WWEARKIWGS IVNDSRSFAK QVISFIQFED DNHHHATKEI RKKIIYRHLA
FINALRMQLR EESDAEKMTA ALSPFLSEEE YNTVRGCSNV ATQLIKNQAA DIRKMYDRKL
LNEYMFVQMD QSLNHFYTYQ GQAERIKKTP FLPTYHFFSK VFLYFFITLL PFSLLSGVDK
AATTWMMLPI TVLIGWVFHM IYMNGHVYAY PFDNTPFDTP MTAICNTIEI DLKEMIGDDS
IPVKMTPTRG ILM
|
|---|
| |