Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1810 |
Symbol | |
ID | 4185036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2124791 |
End bp | 2125951 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638071809 |
Product | sterol desaturase-related protein |
Protein accession | YP_678419 |
Protein GI | 110638210 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3000] Sterol desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0163387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTTG CCAAAAAAAT ATTCGGGATT GTATTCAGCT ACAAAAAAAT AATCTCTAAT CTTTCTATCG GTGCTGCGGA GCGCTTATGC AACATATGGC TTGCCGGGGT GTTCTATTTT GTATTCCGGT ACATTCACAA CCATTTTGCA TTGATTGATA TTGTATCAAG CTGGTACAGC TGGGTCGCAT TAATATTACT CACGGATTTT GTCTGGTACT GGTATCATCG TCTGGGTCAT GAGATCAATA TTTTGTGGGC GTTTCATATT GTACACCATC AGAGTGAAGA CTTCAATTAC ACAACTTCCA CACGCATTAC CGTATTTCAG GCATTGGTCA GAAATGTATT CTGGTGTGTG TTGCCCTTAA TCGGTTTTCC GCCGGAAATG GTAATTCTTA CGTTAGTTAT TCATGGGAGC TATTCGTTTT TTACTCATAC AGAACTTGTC GGCAAGCTTG GCTGGATCGA AAAAGTATTT ATAACACCCT CACACCACCG GGTACATCAC GCTTCCAATA CAGAGTATTT AGACAAGAAT TACGGCGATA TGTTTGTGTT CTGGGATAAA CTCTTCGGAA CATTTAAAGA GGAGCAGACA AAGCCTGTAT ACGGTATTAC CAAGCCCTTA AAAACACACA GTTTCTTATG GCAGCATTTT CACTATCTGA TTGAAATGAG TTACCGGTTT AACAGAACAA GAGGTTTGAA AAATAAATTC AGGATTATAT TCGGTAAGCC TGATGTAATG GATGGGGATG AACGAGAGAT CGTAGAAGCA AACTGGCTGG TGGAAGGTCA GCCGATTCCG GTTTTTGAAA GAAGAAGCGG AAGGTATAAG CGGTACATTA ATGTTCAGTT TGCCGCTATG CTGGCCAGCC TGATCCTGAT TACCTTATAC CATGAACGGC TCAGTGTAAG CAGTAATTTT TTCTTCAGTT CAATTTTGAT CCTGACGCTG GTAAACTGTT GTGCATTGCT GGAGCAGAAA AAATGGATCT TCTTTGTGGA ATATGTCCGG CTGATTCTTT TTGTAGAATA TGTAGCGTTT CAATTCAATG GCTGGTATTA TTTCGTTTTG TGTAATCTCA TTTTACTGTT GTTTACGCTT ACGTACAATA CACTAAGGAA AAAGTATATA CAATTGGTCT ATCAATATTG A
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Protein sequence | MLLAKKIFGI VFSYKKIISN LSIGAAERLC NIWLAGVFYF VFRYIHNHFA LIDIVSSWYS WVALILLTDF VWYWYHRLGH EINILWAFHI VHHQSEDFNY TTSTRITVFQ ALVRNVFWCV LPLIGFPPEM VILTLVIHGS YSFFTHTELV GKLGWIEKVF ITPSHHRVHH ASNTEYLDKN YGDMFVFWDK LFGTFKEEQT KPVYGITKPL KTHSFLWQHF HYLIEMSYRF NRTRGLKNKF RIIFGKPDVM DGDEREIVEA NWLVEGQPIP VFERRSGRYK RYINVQFAAM LASLILITLY HERLSVSSNF FFSSILILTL VNCCALLEQK KWIFFVEYVR LILFVEYVAF QFNGWYYFVL CNLILLLFTL TYNTLRKKYI QLVYQY
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