Gene CHU_1810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1810 
Symbol 
ID4185036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2124791 
End bp2125951 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content40% 
IMG OID638071809 
Productsterol desaturase-related protein 
Protein accessionYP_678419 
Protein GI110638210 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0163387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTTG CCAAAAAAAT ATTCGGGATT GTATTCAGCT ACAAAAAAAT AATCTCTAAT 
CTTTCTATCG GTGCTGCGGA GCGCTTATGC AACATATGGC TTGCCGGGGT GTTCTATTTT
GTATTCCGGT ACATTCACAA CCATTTTGCA TTGATTGATA TTGTATCAAG CTGGTACAGC
TGGGTCGCAT TAATATTACT CACGGATTTT GTCTGGTACT GGTATCATCG TCTGGGTCAT
GAGATCAATA TTTTGTGGGC GTTTCATATT GTACACCATC AGAGTGAAGA CTTCAATTAC
ACAACTTCCA CACGCATTAC CGTATTTCAG GCATTGGTCA GAAATGTATT CTGGTGTGTG
TTGCCCTTAA TCGGTTTTCC GCCGGAAATG GTAATTCTTA CGTTAGTTAT TCATGGGAGC
TATTCGTTTT TTACTCATAC AGAACTTGTC GGCAAGCTTG GCTGGATCGA AAAAGTATTT
ATAACACCCT CACACCACCG GGTACATCAC GCTTCCAATA CAGAGTATTT AGACAAGAAT
TACGGCGATA TGTTTGTGTT CTGGGATAAA CTCTTCGGAA CATTTAAAGA GGAGCAGACA
AAGCCTGTAT ACGGTATTAC CAAGCCCTTA AAAACACACA GTTTCTTATG GCAGCATTTT
CACTATCTGA TTGAAATGAG TTACCGGTTT AACAGAACAA GAGGTTTGAA AAATAAATTC
AGGATTATAT TCGGTAAGCC TGATGTAATG GATGGGGATG AACGAGAGAT CGTAGAAGCA
AACTGGCTGG TGGAAGGTCA GCCGATTCCG GTTTTTGAAA GAAGAAGCGG AAGGTATAAG
CGGTACATTA ATGTTCAGTT TGCCGCTATG CTGGCCAGCC TGATCCTGAT TACCTTATAC
CATGAACGGC TCAGTGTAAG CAGTAATTTT TTCTTCAGTT CAATTTTGAT CCTGACGCTG
GTAAACTGTT GTGCATTGCT GGAGCAGAAA AAATGGATCT TCTTTGTGGA ATATGTCCGG
CTGATTCTTT TTGTAGAATA TGTAGCGTTT CAATTCAATG GCTGGTATTA TTTCGTTTTG
TGTAATCTCA TTTTACTGTT GTTTACGCTT ACGTACAATA CACTAAGGAA AAAGTATATA
CAATTGGTCT ATCAATATTG A
 
Protein sequence
MLLAKKIFGI VFSYKKIISN LSIGAAERLC NIWLAGVFYF VFRYIHNHFA LIDIVSSWYS 
WVALILLTDF VWYWYHRLGH EINILWAFHI VHHQSEDFNY TTSTRITVFQ ALVRNVFWCV
LPLIGFPPEM VILTLVIHGS YSFFTHTELV GKLGWIEKVF ITPSHHRVHH ASNTEYLDKN
YGDMFVFWDK LFGTFKEEQT KPVYGITKPL KTHSFLWQHF HYLIEMSYRF NRTRGLKNKF
RIIFGKPDVM DGDEREIVEA NWLVEGQPIP VFERRSGRYK RYINVQFAAM LASLILITLY
HERLSVSSNF FFSSILILTL VNCCALLEQK KWIFFVEYVR LILFVEYVAF QFNGWYYFVL
CNLILLLFTL TYNTLRKKYI QLVYQY