| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1809 |
|---|
| Symbol | |
|---|
| ID | 4185035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 2123890 |
|---|
| End bp | 2124747 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638071808 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_678418 |
|---|
| Protein GI | 110638209 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3228] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.00108479 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGATC AATTAGAATA TCTTGTAACC AAATCAGATT TTATTTTACC TGGCTTAGTG
ATTTTTTTAC TTGTCTTTTG GGCAGGTTTT GCGTTGCTCG GCTTCTCTCT GTTTAAAGTA
ATAACAGGTG CTGCTAACTT TTTCTTTGAT CGCTACATAC TTTTCGTATA TCAATTGAAC
TATCAGGAGC GAGCATCTCT GGAATATAAA ATTCCTTTCT ATCAAAATTT AAAACCTTCC
TTAAAAAGAA AGTTTGAGTG TAATGTAAAA TATTTTATAC AAAAAAAGGA TTTTGAAGGC
CGGGACGGCT GTACCGTTAC ACCTGAAATG AAATTACTGA TAGCTGCTGC TGCCACACAA
ATTTCATTCG GTCACTTCCC TACTATCTAT GAGCACTTCA GAAAAATAAT CATTTATCCG
GACAAATATT TTTCAGGAAG TACACAGCGT TATCACTTGG GCGAAGTTCA GTCCAACGGT
GTTATAAAAT TATCCTGGGC TGCATTTACC GAAGGGCTTC GCATAAAAAA TGATGGCGTA
CATGTAGGCT TTCATGAAAT GGCGCACGCG TTAAAGATAG AAGATTCAAC CTTACATGAT
ATGGAACATT GTTTCATGGA CAAAAAAGCA TTGCATGATT TCCATTCTTA TTCCAATGAC
CGTATCCGCA GCCATGGATC GCAGTCTTTT ATGCGGGATT ATGCTTTCAG TAATTCAGAA
GAGTTTTTTG CAGTAAGTAT TGAATACTTT TTCGAAACAC CTGCTCAATT AAGAAAAAAT
GAACCTGTGG TATATGATTA TTTAACACGT ATCCTAAAGC TGGATCCGTT AAATCATACC
AATCCGGTGC TTACATAA
|
|---|
| Protein sequence | MEDQLEYLVT KSDFILPGLV IFLLVFWAGF ALLGFSLFKV ITGAANFFFD RYILFVYQLN
YQERASLEYK IPFYQNLKPS LKRKFECNVK YFIQKKDFEG RDGCTVTPEM KLLIAAAATQ
ISFGHFPTIY EHFRKIIIYP DKYFSGSTQR YHLGEVQSNG VIKLSWAAFT EGLRIKNDGV
HVGFHEMAHA LKIEDSTLHD MEHCFMDKKA LHDFHSYSND RIRSHGSQSF MRDYAFSNSE
EFFAVSIEYF FETPAQLRKN EPVVYDYLTR ILKLDPLNHT NPVLT
|
|---|
| |