Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1799 |
Symbol | |
ID | 4184695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2112187 |
End bp | 2114415 |
Gene Length | 2229 bp |
Protein Length | 742 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638071798 |
Product | hypothetical protein |
Protein accession | YP_678408 |
Protein GI | 110638199 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.541739 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCATGA TCTTTCGGCT ATTATTCAGT TCTTTGCTAT TTGTATACAC ACACGCCTCT TTTGCACAGG TAGACAAGGA ATTCTGGTTT GCGGTTCCGT ATGCAAATCC AACCAATGGA AACCTGCCTG TTTTTTTACG GTTCCAGAGT TTTGACCAAG CCGTTCAGAT CACCATTGAT ATTCCGGCAA ATACTACCTT CACAAAAAAA GTTTATGCCA TTGCTGCACA CAGCGCATAC TCTATTAATA TCTCCAGCTG GCTTTCATCT CTTGAATGTG TTCCGGAAAA TACCATCCTG AACAAAGGCT TACACATTGT TGCAACACAT GAAATAAGTG CCTATTATGA ACTATATGGA ACCAGTGCGT ATGCTCCGGG CACAAACAGT GATCTGTTTG CATTAAAAGG CCGTAATGCT TTAGGCACTG AATTCCTCAC GCCTTTTCAA ACACGCTGGA ACAATCAGGT AAATATAAAT GCCTGGGCTA GCTTTGATAT TGTTGCCACT GAAAACAACA CTACTGTAAC CATTACCCCA ACCAGACGCA TTCAGGGTCA TGTTGCAACA GTTCCGTTTA CGATTTTACT GCAAAAAGGA CAGACGTGGA GCGGCAGGTC TTCCTTTATT GATGCCGGCC TACGGCCCGT TGGCTCATTG ATTGAATCAG ACAAACCAAT TGCCGTTACT CTAAAAGATG ATTCCATGTT AAAAAATAAT AACTGGGATC TGGGCGGCGA TCAATTGATT CCGGTCTCTC AAACAGGCAA AGAATACATC ATTTTAAAAC ACACACTTAA TACTGGTACA GATAATGACT TTGCATACAT ACTGGCAACA GAAGATAATA CCGAAATATT TCTCGGGGAT CTTTCCACAC CAGCCACGCT GAATAAAGGA GAACAAATGG AAATCCCGGT TCTGGAATCC ATGTTGATTC ATGCCTCCGA GCCGGTATAT GTGCTGCATG TAACAGGTTT TGCAAATGAA CTTGCCGAAG CAATTCTGCC GCAATTAGAA TGTACCGGAT CCAAAGAAGT AGGTTTTATC CGTTCCAATC AGGAATCATT TGTGTTGAAT ATTCTTACAG AAAAAGGTAA TGAAAACAAC TTTTTACTGA ACGGAACAAA CACGCTTATT AAAGCAAGCG ATTTTTCAGA AGTAACTGGA ACTTCCACCT GGGTATATGC CAGCAAACAA TTTAGCATAC AACAAATTCC TGCATTAAAA GCGAATATAT TAAAAAATAC GTCGGGTTAT TTTCACCTGA GTATAATGAA TGGCGCCAAT GATACCGGCT TCAGATATGG GTATTTTTCA GATTACGGAT TTGTGGATCT GGGTCCTGAT ACATTAATGT GTACGGGAAC TGAATTAGAG CTTTCTGCCG GTGTGCAAAA AGACAGTTAT GTATGGTCAC CTACCCAAGA AACGACTTCA ACAATTATTG CACGAGATTC AGGTACGTAT TCCGTGGTAG TAAAAAAATT ACAGTGCGAA TTTAAAGACA CGATACATAT CGCGTTCTTC CCTCCTTCCG GCGATATCAT TATTGATGGC AAAGACAGCA CCTGTGCAGA TATTCCATTG ACGATACACA CAAATATTGG ATTTACGGAC TACAACTGGT CTACAGGCGC TAATGCGGAT TCCATAACGG TGACAAACAG CAATAAATAT CGTGTACTTG CAAAGGATGT ACATGGTTGT GCAGCTAAAG ATTCTGTTAC GATAACCGTA ACACCTCTAC CTTCCGGCAG TATCAGTTTC TCCCCAACGG ATGATCAAAC ATTTTGTGAC GCTGCCACTA CACAGGCACA ATTTGACGCA CCACTTAATT ACTCCGCTTA TCTGTGGTTT AATGGAAACA CTACCCAGCA GATACAGTCA CCTAAATCTG CCGATGGTAT ATATTGGGTT AAGCTTACGG ATAGTCTGGG CTGTAAAAAC ACATTGAACC TTGAAGTAGA TTGCTCCACC TTTATTACCG TATATAATTT AGTAACGCCA AACGGCGATG GTCTAAATGA TTATTTCGAA ATAAAAGATT TGCAATACAA TACCTATTCG TTAAAAGTAT ATAACTGTTG GGGGGCTTTA GTATATTCGA ATAATAATTA CAACAACGAC TGGAACAACG ATTCATTAGC AGATGGTGTG TATTATTACA GTTTAACCCA TTATAAAAAT AAACGGAATT TAAAAGGCTG GTTTCATGTA CTTCATTAA
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Protein sequence | MTMIFRLLFS SLLFVYTHAS FAQVDKEFWF AVPYANPTNG NLPVFLRFQS FDQAVQITID IPANTTFTKK VYAIAAHSAY SINISSWLSS LECVPENTIL NKGLHIVATH EISAYYELYG TSAYAPGTNS DLFALKGRNA LGTEFLTPFQ TRWNNQVNIN AWASFDIVAT ENNTTVTITP TRRIQGHVAT VPFTILLQKG QTWSGRSSFI DAGLRPVGSL IESDKPIAVT LKDDSMLKNN NWDLGGDQLI PVSQTGKEYI ILKHTLNTGT DNDFAYILAT EDNTEIFLGD LSTPATLNKG EQMEIPVLES MLIHASEPVY VLHVTGFANE LAEAILPQLE CTGSKEVGFI RSNQESFVLN ILTEKGNENN FLLNGTNTLI KASDFSEVTG TSTWVYASKQ FSIQQIPALK ANILKNTSGY FHLSIMNGAN DTGFRYGYFS DYGFVDLGPD TLMCTGTELE LSAGVQKDSY VWSPTQETTS TIIARDSGTY SVVVKKLQCE FKDTIHIAFF PPSGDIIIDG KDSTCADIPL TIHTNIGFTD YNWSTGANAD SITVTNSNKY RVLAKDVHGC AAKDSVTITV TPLPSGSISF SPTDDQTFCD AATTQAQFDA PLNYSAYLWF NGNTTQQIQS PKSADGIYWV KLTDSLGCKN TLNLEVDCST FITVYNLVTP NGDGLNDYFE IKDLQYNTYS LKVYNCWGAL VYSNNNYNND WNNDSLADGV YYYSLTHYKN KRNLKGWFHV LH
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