| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1788 |
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| Symbol | |
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| ID | 4184684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2096618 |
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| End bp | 2098069 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638071787 |
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| Product | permease |
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| Protein accession | YP_678397 |
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| Protein GI | 110638188 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0970629 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTA TTAAGCGTTT AGATTTACTT GTATTAAAAG CCTTCTTCGG ACCGTTTATA
TTGACTGTTT TTGTGGTTAC GTTCATTTTT TTAATGCAAA CCATTTTAAA GTATATTGAT
GAACTGGTTG GTAAAGGCTT GAGTTATTTG GACTATGCTG AATTGATGAT GTATTTCAGC
ATGAACATTC TGCCTGTTGC GTTGCCGCTT GCCATCTTAT TATCTTCTTT AATGACCTTT
GGAAACCTGG GGCAGTTTAA TGAGCTGACA GCGATAAAAT CTTCCGGTAT CTCACTGATC
CGCGTTATGG TACCGATTGC GATCTGGGTA TTGGGCTGCA CGGTTGGCTT ATACTTTTTT
AATAATTATG TAGTACCTAA GGCGAACTTA AAAGCATTCA GTCTGCTGTA CGATCTACGG
CAAAAGAAAC CTTCCCTGGA TCTGAAGCCG GGAGTATTTT ATAACGGGAT ACCGGGTTAC
AGCATAAAGA TTGTTCAGAA ATTTGATAAT GATTCTTCTA TTAAAGGAGT AATTATATAC
GATCATACAC AGAGCCGCGG CAATACCGAT GTGATTATTG CCGATTCAGG TTCTATGTAT
CTTTTTAATC AAAGCCAGTA TCTGGCACTC GAACTTTTCA GAGGGAACAG CTACAACGAA
TTTAAAGGAG AAGGAGGGAT GAGTTATATT AACCCCGAAG AGTTTGTGCG AAACTCCTTT
GACAAAACAA AGATTGTGTT TAACCTGTCT TCTTTTGATT TGAAAAAAAC GAAAGAAGAA
TTATTTATGG GAAGCAGGCA AATGAAAGGA GTAGATGAAC TGGATCACCA TATTGATTCA
ATTCAGAGAA TGTTTGTGTC TGTGAATAAA AATTCAAGCG GCATGCTGCA GCCGTTCTAT
TATTATACAA CGGTAAATCC ATTGGATTCT ACTAAAAATA AGGCTGTTGA GCATGATTCT
ATAAAGCTTT CAAAGAAAGC GCTTCTGGCT GAAAGTCCGG GTAAGGAAGT GGCGCAGCGG
GCGGCTAATC AGGCACGTTC TATAAAATCA TACCTGCAGG GAAATGTAGA ACGTGATGAA
CGGTTCATAA AAGAGATTCA TGAATTTGAA GTGACCAAAT ACCAGAAATT TACCCAGGCG
GTTGCCTGTT TTGTATTGTT CTTAATCGGT GCACCATTAG GTGCTATTAT CAAAAAAGGT
GGCTTGGGTA TTCCGGTGCT TATTTGTATT ATATTTTTCA TTTTTTATTA TGTATTCAGC
ATTACAGGTG AAAAATGGAC AAAAGAAGGG GTTTATCCGG CTGATTTCGC CATGTGGTTT
GGAAACGGCA TTCTATTTTG CGTTGGATTA TTTTTTATGA GACAGGCAAA AAATGACTCC
AGGATACTTG AAACGGACTT TTATCTCATT TTCTTTGATC GCATTAAGAA ACTATTGCCA
AAGAAGAAAT AA
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| Protein sequence | MKIIKRLDLL VLKAFFGPFI LTVFVVTFIF LMQTILKYID ELVGKGLSYL DYAELMMYFS
MNILPVALPL AILLSSLMTF GNLGQFNELT AIKSSGISLI RVMVPIAIWV LGCTVGLYFF
NNYVVPKANL KAFSLLYDLR QKKPSLDLKP GVFYNGIPGY SIKIVQKFDN DSSIKGVIIY
DHTQSRGNTD VIIADSGSMY LFNQSQYLAL ELFRGNSYNE FKGEGGMSYI NPEEFVRNSF
DKTKIVFNLS SFDLKKTKEE LFMGSRQMKG VDELDHHIDS IQRMFVSVNK NSSGMLQPFY
YYTTVNPLDS TKNKAVEHDS IKLSKKALLA ESPGKEVAQR AANQARSIKS YLQGNVERDE
RFIKEIHEFE VTKYQKFTQA VACFVLFLIG APLGAIIKKG GLGIPVLICI IFFIFYYVFS
ITGEKWTKEG VYPADFAMWF GNGILFCVGL FFMRQAKNDS RILETDFYLI FFDRIKKLLP
KKK
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