| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1787 |
|---|
| Symbol | rpsO |
|---|
| ID | 4184683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 2096246 |
|---|
| End bp | 2096521 |
|---|
| Gene Length | 276 bp |
|---|
| Protein Length | 91 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638071786 |
|---|
| Product | 30S ribosomal protein S15 |
|---|
| Protein accession | YP_678396 |
|---|
| Protein GI | 110638187 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0184] Ribosomal protein S15P/S13E |
|---|
| TIGRFAM ID | [TIGR00952] ribosomal protein S15, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.269109 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0816599 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATCTTA CAAGCGAAAT CAAAAAAGAA ATCTTCAAGA CAAACGGAAC AGCCAAAAGT
GCAACAGATA CAGGTTCTCC AGAGTCACAA ATTGCTTTAT TCTCTCACCG CATCGCGCAT
TTAACGGAGC ATTTGAAAGT TAACAAAAAA GACTATTCAA CGCAGTTAGG TCTGATGAAA
TTGGTTGGTA AAAGAAGAAG ATTGTTAAAT TATCTTCAGA AAACTGAAAT TTCTCGTTAT
AGAGCAATTA TTGCTCAATT GAATTTGAGA AAATAA
|
|---|
| Protein sequence | MYLTSEIKKE IFKTNGTAKS ATDTGSPESQ IALFSHRIAH LTEHLKVNKK DYSTQLGLMK
LVGKRRRLLN YLQKTEISRY RAIIAQLNLR K
|
|---|
| |