Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1784 |
Symbol | |
ID | 4184680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2091250 |
End bp | 2092902 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638071783 |
Product | hypothetical protein |
Protein accession | YP_678393 |
Protein GI | 110638184 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.135796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.121637 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGATTA AACGTTTTTT ATCCGTATGT CTTTTTGCTT TTTTCTTTCA GATGCCCTCA TATGCTCAAT TTAATCTAAT CAAAGATTTT GATGGTACAG AATTAAGCTC TTTTCACCTT TATTATTCTG GTATTGTATA TGCTACAGGA GATAAAGTCA TCGTTCAATA CGATTCAATA GAGGCTGGTC ACTATGTTTC TAAATCGGTT CTGGCTTCCA TAAATAAATC CGGAAAACGT GAATTTATAA TCTCCGTTAC TACAGACATG AATGATCATA GTAGAAATTT TTTCTTCGAT TTTAAAACAT TAAAAGATGG CAGAGTTGTC TTTGTTGCGG AACAGTCAGC CACATCAGCA AACATTATCA TAACGGACGG TACTTCCAGC GGAACTACAA CCTTATATAC AGGTTCTGAG ATGATCCAGG GATTAGAAGT GATGAATGAT AACCTGTATT TTACATACGA TGGTTTGTCA TTTCATTCGT TGAAAAAGAT TGACATGACA ACCTTGCAGG TTTCTGAGGT TATTGAATTA GGATCATTCC GGAAGATTTC AGGGATTAGC AACGTTTCAA ATACAGCAAT GATTTTTATT GCCCCGGATG TAACTGAAAA TAACAAGGTG AAATTGTATG TTTCAGATGG AACAGCATCC GGCACTAACG TATTGGCAGA ACTGCTGGAT AGCGGAATAG AAGAGCCACA AAATACTGTA ATGACACGGG TTGGAAATAA AGTATATTTT TTTTACAAAA GACCGGGTGA AGATTGCTGC AACGATCTGT GGGTAACGGA TGGTACCATT GCCGGAACAA AAAAACTGAA GGAATTTAAT ACAATATATT ATAGTGATTT TGTAAAAGAA AAAAAGGCAA TTGGTTTTAA TGATAAATTT TATTTTTCCG GAGTTGAAAC GGGTACTCGC ATATCTACCA ACGAAGTGCT TTGGGTAAGT GACGGTACAA CGGAAGGAAC AATTGCACTA ACGGATGCCG ATGAAAGTAT GAGTCCCCGA AATTTAATGG TATTCAATAA TTCCTTATAT TTTATAGCAT TTGATGGTTC TGTTTATAAT AATAAACTTC ATAAAACGGA CGGAACGGTA GCCGGAACAC ATGTTGTAGA TATAACATAC AATACACATA TTCTTTCCAT TTCTTCTATG GCAGCGGATG CTGATTATAT CTATTTAGGT GCAGTTAATG TGAATGCTTC GTTTTGGTCG GCATTATTCC GTTTTAATGG CAGCAAGTTA GACGTTGATA TTCTTGACGA CGAAAAAATT ATTGATGTAC CAAAGAACCT GTATGTAAAT GGAAGTGATG TATATTTTAC AGCCAATGTA CATGGAACGG GAGAAGAGTT GTATACAATG GGCGGCGATT TTATTTCAAG TAATGTTACC AGCACGAAAT CTGCTGCATT CCATTCATGC ACACTATATC CGAATCCTGC ATCAAGTCAC ATAACAGTTA AAACAGCACA GCAAATCAAA TCGTTACGAC TTATTAATCA ATTTGGTAAT GTACTTTTGG AAACAAATGA AAATACTATT CCTCTGGAAT CTTATTCAGA AGGAATGTAC TTCGTAAATA TTCAGTTACA AAATGGTGAA ACAGCTTTTG AAAAGATCAT GATTGTTAAA TAA
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Protein sequence | MMIKRFLSVC LFAFFFQMPS YAQFNLIKDF DGTELSSFHL YYSGIVYATG DKVIVQYDSI EAGHYVSKSV LASINKSGKR EFIISVTTDM NDHSRNFFFD FKTLKDGRVV FVAEQSATSA NIIITDGTSS GTTTLYTGSE MIQGLEVMND NLYFTYDGLS FHSLKKIDMT TLQVSEVIEL GSFRKISGIS NVSNTAMIFI APDVTENNKV KLYVSDGTAS GTNVLAELLD SGIEEPQNTV MTRVGNKVYF FYKRPGEDCC NDLWVTDGTI AGTKKLKEFN TIYYSDFVKE KKAIGFNDKF YFSGVETGTR ISTNEVLWVS DGTTEGTIAL TDADESMSPR NLMVFNNSLY FIAFDGSVYN NKLHKTDGTV AGTHVVDITY NTHILSISSM AADADYIYLG AVNVNASFWS ALFRFNGSKL DVDILDDEKI IDVPKNLYVN GSDVYFTANV HGTGEELYTM GGDFISSNVT STKSAAFHSC TLYPNPASSH ITVKTAQQIK SLRLINQFGN VLLETNENTI PLESYSEGMY FVNIQLQNGE TAFEKIMIVK
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