Gene CHU_1781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1781 
Symbol 
ID4184677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2087256 
End bp2089184 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content40% 
IMG OID638071780 
ProductFAD/FMN-containing dehydrogenase 
Protein accessionYP_678390 
Protein GI110638181 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.926813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0106686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGCGA TCAAAATTAT TTTCCAGTTA CTGTTTACAC TTCTTTTCAG AAGAAAGAAA 
CTGCCTGAAA CCATTGATAA AATAGATATT CAGCTTACAC AAAAAGTATC CGATGCCGAA
CGGCTAAAGA CGGTATCGTT ATTAAATAAA ATTTTCGGAA CACGCATTGT ACGTTGGATC
ATGGAATTTT TTCTTTGTAA AGCATCCAAA GGAGAATTCA TTGAAATAAA TAATGCAGAT
TTTATAAAAC GATACCAGCG CTACATTCCG GAAACAGATG AACGGATCAG CTGGACGAAC
TGGGCCAATA CTCAAAAATC TCAACCGCTT AAATATTACA TTCCGGGTAA TGGCCCGCAT
GTTAAGGTTA TTGAAACATA CCAGCAGCTT GGCGACTATG ATTTCAAAGG CTTAAAGGAA
ATTCAGGGAA TCGTAACAGA TGCAGAGGAA AAAGGTTTAC GTGTGCGTTG TGTTGCTTCC
GGGCATTCAT TATCAGACAT TGCTGTAACA GGTGATTTCA TGATTAGTAC AAAAAAAATG
ACTCGTCCGC AGCGTCGTGC AAATCAGCCT TATATCAAAG AAAAATTCCG TAATGGCTAT
ACTTCCTATA TTCACAAAGA TACGCAGGTT ATTCCGGAGA AGCGCTATTT ATTTGAAACC
GGCGCTGGTA CACTGCTGGA AGATCTGAAA CAGATCCTGG AAAAAGAAGG TCTTGCATTT
GCCAATATGG GCGGCTCAGA CGTGCAGGGT TTTATGGGCG CTGCGTCCAC ATCTACGCAT
GGATCGGGAA TCGGATTAAA ACCGTTTCCG GATATGATCG CATCCATGGT GCTTGTGGGA
AGCCATGGAA AAGCGTATCG GCTTGAACCG GCCGATGGCA TTACTGATCC CTCGGTATAT
GCCGCTTCTG AAGAATATCA AACCCATGGC ATTGAACTGA TACAGGATGA TGATTTGTTT
TATTCATCCA CTGTATCTAT GGGCTGCTTT GGCGTTATCT TTTCTGTTGT GATTGAAGTT
GTAGATTTTT ATTACCTTAA AGAAGAACGG ATACCAGGTA CTTGGGAAGA AGAACGCCAG
AAATTGGCAT CCTTAGGTTT AAATTATATT CGTAAGAACC GCCACTTTGA ATTGGCTGTA
AACCCGTATC CGGTAAATGA TAAAGGAGAA CTGGATAAAG TAAACGGTAA AAGATATTGC
ATTGTAACCA CGCGGAATAT TATACCTAAA CCCGCGGCAA AGCAGGATAA TACGTCTTCA
GAAAAACGGA ATTTTTTATC TTCCCTGGCA TCCGGCTTGT ATTTCGTTGG TTCGATTTCA
GTATTTTTAT TTAATAAAAA ACCTGCCAAT ATTCCGCGCT CCATTTCCAG TTCATTAAAG
CGTATTGTTG ACTGTGACAA ACAAGGCGGA GGATATTCCG ATAAGTATTA CAATGTGCTT
AATCAGGGTT TGCTTGAAAT GAAATTTTTC GGGTATGCTT CTGAAATGGC TTTTACCATG
CAGGATGATA CCTACCTGAA AGCTATAGAT AAAATTCTGG ATGAATCGGT ACGCATGGCA
GAAGAATATG GACAATACAA TCCAAGCCCG ATTGCCATAA GGTTTACCGA TGACTCGCAT
TCCTATCTTT CAATGATGCA TAATATGGCA GCATGCAGCA TTGAAGTTGT AAGTTTAAAA
GGCTTCATAG GAGGTGAAAA TTTTCAGCGC CGCATTGAAA GAGAAATGAT TGCTTTTAAT
GGAAGACCAC ACTGGGGATT ACATCTGGAA AGCCTGTCCT TTGACCGGAT TGAAAAACTA
TATCCCAAAT TACCGGTATG GTTGCAGGCA TATAAAAAAT TCAATCAATC ACGTGTGTTT
AATAATTCGT TTACAGACCG TACAGGCATA TCTGCTGTAC TTGGACAACA GGAAGCATTT
TTGGAATAA
 
Protein sequence
MLAIKIIFQL LFTLLFRRKK LPETIDKIDI QLTQKVSDAE RLKTVSLLNK IFGTRIVRWI 
MEFFLCKASK GEFIEINNAD FIKRYQRYIP ETDERISWTN WANTQKSQPL KYYIPGNGPH
VKVIETYQQL GDYDFKGLKE IQGIVTDAEE KGLRVRCVAS GHSLSDIAVT GDFMISTKKM
TRPQRRANQP YIKEKFRNGY TSYIHKDTQV IPEKRYLFET GAGTLLEDLK QILEKEGLAF
ANMGGSDVQG FMGAASTSTH GSGIGLKPFP DMIASMVLVG SHGKAYRLEP ADGITDPSVY
AASEEYQTHG IELIQDDDLF YSSTVSMGCF GVIFSVVIEV VDFYYLKEER IPGTWEEERQ
KLASLGLNYI RKNRHFELAV NPYPVNDKGE LDKVNGKRYC IVTTRNIIPK PAAKQDNTSS
EKRNFLSSLA SGLYFVGSIS VFLFNKKPAN IPRSISSSLK RIVDCDKQGG GYSDKYYNVL
NQGLLEMKFF GYASEMAFTM QDDTYLKAID KILDESVRMA EEYGQYNPSP IAIRFTDDSH
SYLSMMHNMA ACSIEVVSLK GFIGGENFQR RIEREMIAFN GRPHWGLHLE SLSFDRIEKL
YPKLPVWLQA YKKFNQSRVF NNSFTDRTGI SAVLGQQEAF LE