Gene CHU_1767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1767 
Symbol 
ID4186839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2073954 
End bp2074688 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content40% 
IMG OID638071766 
ProductATPase 
Protein accessionYP_678376 
Protein GI110638167 
COG category[R] General function prediction only 
COG ID[COG2102] Predicted ATPases of PP-loop superfamily 
TIGRFAM ID[TIGR00290] MJ0570-related uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0219688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0604046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTAA AAAGTAATTC TGCCATACTG CCCAAAGCAT TGTTTTGCTG GAGCGGCGGA 
AAAGATTCTG CTTATTGCCT GCATAAGGTA TTGTTGGAAA AGCAATTTGA TGTTTGCTAC
TTACTTACTA CCGTTAATGA TACATTCAAA CGGATTTCGA TGCATGGCGT GCGCGAAACA
TTGCTGGATA AACAGACAGA ATCCATCGGC ATTCCTTGTA TAAAGATCCG CATTAAAGAA
GGTACTAACA GCGAATACGA ACAGCTGATG GAAACAACGC TGCTTAAAGC AAAGGAAGAA
GGAATCACAC ATGTGATCTT TGGTGATATT TTCCTGGAAG ATTTACGCAC ATACCGGGAA
AACAATTTGG ACAAAGTTGG CTTACAGGCT GTATTTCCCT TATGGAAAAT GGATACCGGA
ATATTGATCC GGGATTTCAT ACGTAAAAAA TTCAAGACCA TTCTCTGTTG CATCAACGAT
GGGTACCTCG ATGAAACCTG GGCAGGAAGA GAAATTGATG CTGTATTTAT TGCTCAGTTA
CCCGGCCATG TAGATCCTTG CGGAGAGAAC GGAGAGTATC ATACGTTTTG TTACGACGGG
CCATTATTTC AAAAAGCAAT TACTGTTTCT ACCGGTGAAA AAATATATAA ACCCTTAGAC
TATTCGCTGG ATGATGTCTG TCAATCAACT GTACCAACAA AAGGTTTCTG GTACTGCGAT
TTAATTCCCG ATTAA
 
Protein sequence
MGLKSNSAIL PKALFCWSGG KDSAYCLHKV LLEKQFDVCY LLTTVNDTFK RISMHGVRET 
LLDKQTESIG IPCIKIRIKE GTNSEYEQLM ETTLLKAKEE GITHVIFGDI FLEDLRTYRE
NNLDKVGLQA VFPLWKMDTG ILIRDFIRKK FKTILCCIND GYLDETWAGR EIDAVFIAQL
PGHVDPCGEN GEYHTFCYDG PLFQKAITVS TGEKIYKPLD YSLDDVCQST VPTKGFWYCD
LIPD