| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1755 |
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| Symbol | pdhC |
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| ID | 4184845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2061080 |
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| End bp | 2062744 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638071754 |
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| Product | dihydrolipoyllysine-residue acetyltransferase (dihydrolipoamide S-acetyltransferase) |
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| Protein accession | YP_678364 |
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| Protein GI | 110638155 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.145562 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAT TGATTAAAAT GCCTAAAATG AGCGATACCA TGACAGAAGG TGTTATCGCG
GCATGGCACA AAAAAGTAGG AGATAAGGTG AAATCCGGAG ACCTTTTAGC AGAAGTTGAA
ACGGATAAGG CTACCATGGA AATGGAATCT TATGAAGACG GAACACTCCT ATATATAGCA
GCTGAAGCAA AAAGTGCAGT ACCTATTGAT GGTGTAATTG CAGTAATTGG TAAAGATGGT
GAAAATATTG ATGCTTTAAT TAAAGAAATC AAAGGTGGCG GTGCACCAGC TGAGGCTCCA
AAAACAGAAG CTAAAGCAGA AGCAGAGGTA CCAAAAGCTG AAAAGCCTGC GGAAGCGGCT
AAACAGGCTG CACCTGCAGT AGATCTTTCT TCTATCAAAG CAGAAGCGAT CTTAATGCCT
AAAATGAGTG ATACAATGGT TGAAGGGACA ATTGTAGCAT GGCATAAAAA AGTTGGAGAT
GCAGTTAAGT CTGGTGAGTT ACTTGCAGAA GTAGCTACTG ATAAGGCTAC CATGGAAATG
GAATCTTATG AAGACGGAAC ACTTCTTCAC ATTGAAGTAA AAGAAGGAGA TGCGGTTCAG
ATCGACGGCC TGATTGCCAT TATTGGTGAA AAAGGAACAG ATGTAACACC GATCATCAAC
GCATATAAAA ACGGCGGTAA GCCATCTGCA GCTCCGGCAG CAGCAAGCGA ACCGGCTAAA
CAGGAAACAG CTTCTGCACC CGCATCAAAC AATGCTCCTG CAGCACAGGC TTCTTCCTCT
TCAGATGAAA GAGCCAAGAT TTCTCCGCTG GCACGTAAAA TTGCTTCAGA CAAAGGAATC
GATATCAAAC AGGTTAAAGG TTCAGGAGAT CACGGCCGTG TTATAAAACG CGACATTGAA
AACTTTAAAG CGGCTCCGGC TGAAGCAGCT CCTGCTAAAG GTTCCGGCGC TCCGGCAGCT
TCATTACCAA ACATAGTTGG TCAGGAAGGC TTTGACGAAG TACCGGTTTC ACAAATGCGT
AAAGTAATCG TGAAACGTTT ATCTGAAAGC TTATTCACTG CTCCGCACTT CTATTTAACC
ATGGAAATCA ACATGGATAA AGCGATAGAA GCACGTGCAA GCATCAATGA AGTAGCTACA
GCGAAAGTTT CATTCAATGA TATGGTGATC CGTGCAAGTG CAGCAGCGCT TCGCAAACAC
CCGATGGTGA ACGCTTCGTG GCAGGGAGAC AAAATCCGTG TGAACCACCA CATTCACATT
GGTGTTGCCA TTGCTATTGA AGATGGACTT GTTGTTCCGG TAGTACGTTT CGCAGATTCT
AAATCCTTGT CTCATATTTC TCAGGAAGTA AAAGAACTTG GCGGTAAAGC AAAGAGCAAA
AAAATACAGC CTGCAGACAT GGCCGGCAAT ACATTCACGA TCTCTAACTT AGGTATGTTT
GGTATTGATG AGTTTACATC GATCATCAAC TCTCCGGATG CATGTATCTT ATCCGTAGGC
GGTATCAAAC AGACTCCGAT CGTTAAAAAC GGACAGATTG TAGTTGGTAA CATCATGAAA
GTAACCTTAG CGTGCGATCA CCGTGTAGTA GATGGTGCAG TAGGTTCAGC GTTCTTACAG
ACATTAAAAA GCTACCTTGA AGATCCGGTA CGTATTCTTG CGTAA
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| Protein sequence | MAELIKMPKM SDTMTEGVIA AWHKKVGDKV KSGDLLAEVE TDKATMEMES YEDGTLLYIA
AEAKSAVPID GVIAVIGKDG ENIDALIKEI KGGGAPAEAP KTEAKAEAEV PKAEKPAEAA
KQAAPAVDLS SIKAEAILMP KMSDTMVEGT IVAWHKKVGD AVKSGELLAE VATDKATMEM
ESYEDGTLLH IEVKEGDAVQ IDGLIAIIGE KGTDVTPIIN AYKNGGKPSA APAAASEPAK
QETASAPASN NAPAAQASSS SDERAKISPL ARKIASDKGI DIKQVKGSGD HGRVIKRDIE
NFKAAPAEAA PAKGSGAPAA SLPNIVGQEG FDEVPVSQMR KVIVKRLSES LFTAPHFYLT
MEINMDKAIE ARASINEVAT AKVSFNDMVI RASAAALRKH PMVNASWQGD KIRVNHHIHI
GVAIAIEDGL VVPVVRFADS KSLSHISQEV KELGGKAKSK KIQPADMAGN TFTISNLGMF
GIDEFTSIIN SPDACILSVG GIKQTPIVKN GQIVVGNIMK VTLACDHRVV DGAVGSAFLQ
TLKSYLEDPV RILA
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