Gene CHU_1739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1739 
Symbol 
ID4183920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2045822 
End bp2046616 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content35% 
IMG OID638071738 
Producthypothetical protein 
Protein accessionYP_678348 
Protein GI110638139 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.800192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.335767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACATA TTAAATTAGT AAGTAAATTA TTATTATCTG CTATAGTCCT TTTTAGCGTA 
TTTACGTCTC AAGCTGGAAT ATTGACAATA TCAGGTGTTT ATCAAGGTAA AAACCTATAT
GTTCAGAACC CATTTGCAGG TAACATGCGT GATTATTGCA CAAATGATGT TTATGTGAAT
GAAGTGAAGA AGGAATACAA TGTTGCCAGC AGCGCATTTG AAATAGATTT ATCTTTCATG
AAAATCGGTG ATCCGGTTAC CATAAAAATT ACGCATAAAG ACGATTGCAA ACCTAAGATT
TTAAATCCGC AGGTTATTCA GGCAACAAGT GCTTTCTCAA TCAGTTCATT TTCAGTTGAT
CAGGATCATA TTTTGTGGTC TACAAAAGGA GAGCGTCCTA AAGGTAAAAT GTTTGTTGAG
CAAATGAGAT ACAATACATG GGTAATTGTA AAGGAATTAA ATGGCTTAGG TAATTCATTG
ATGAATTCAT ATCAGACAGA ATCATTCCAC CATTCAGGTG TAAATCAATA CAGAATCAAA
TACCTTGAAG TAGATGGTCA GATCAAATAT TCTTCAACAG TAGAATATAC ATCAACATTA
GCTCCGGTAA CATTCTATCC GCATCGTGTT ACAGATAAAA TTACCTTATC AAGACCGGTT
GAGTATGAAC TGCAGGATGC GTTTGGTAAC GTTATCAGAA AGTCTAAAGG TAGTGAAATT
GACATTGCGA CTTCTCCAAC AGGTGTTTAC TACCTAAACT GCGATAACCA GACGTTCAAA
ATATTCAAGA AGTAA
 
Protein sequence
MTHIKLVSKL LLSAIVLFSV FTSQAGILTI SGVYQGKNLY VQNPFAGNMR DYCTNDVYVN 
EVKKEYNVAS SAFEIDLSFM KIGDPVTIKI THKDDCKPKI LNPQVIQATS AFSISSFSVD
QDHILWSTKG ERPKGKMFVE QMRYNTWVIV KELNGLGNSL MNSYQTESFH HSGVNQYRIK
YLEVDGQIKY SSTVEYTSTL APVTFYPHRV TDKITLSRPV EYELQDAFGN VIRKSKGSEI
DIATSPTGVY YLNCDNQTFK IFKK