Gene CHU_1729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1729 
Symbol 
ID4183910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2033555 
End bp2034136 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content42% 
IMG OID638071728 
Producthypothetical protein 
Protein accessionYP_678338 
Protein GI110638129 
COG category[S] Function unknown 
COG ID[COG4430] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.136208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.857524 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAG AACCGGTAGA ACTGTTTTGT CCGGCTACTC AAAAGGAGTG GCGGAAATGG 
CTGCAAAAAA ATCACCATTC AAAGGAATCT GTCTGGCTCG TTTGCTATAA AAAACATGCA
GTTAAACCAA GTATTCCCTG GAGTGCCATT GTAGATGAAG CCTTATGCTT TGGCTGGGTA
GATGGTAAAC GGAAATCGAT TGATGCCGAT TCGTTTATGC AATTTTTATG TAAGCGTAAA
CCAAACAGCA CGTGGTCAAA AGTAAACAAG GAAAAAGTAC AGCAGCTGAT TGCTGCTGAG
TTGATGACTC CGGCTGGCTT GGAAAGTATT GAAACAGCGA AAAGAAATGG TTCATGGAAA
ATACTGGATG AGGTAGAAGC ATTGATCATA CCGGAGGATC TGGAGAAAGC CTTTAAGGCA
TATTCTGGTT CCAAAGCATT CTTTTTAAGT TTAAGTAAAT CGGTTCGGAA AACACTGCTG
CAATGGCTTG TGCTTGCTAA ACGGGCAGAG ACCAGACAAA AACGCATAAC CGAAATAGCG
GAACATGCCG GTGAAAAGCT GAAACCTAAA CCGTTCAGAT AA
 
Protein sequence
MEKEPVELFC PATQKEWRKW LQKNHHSKES VWLVCYKKHA VKPSIPWSAI VDEALCFGWV 
DGKRKSIDAD SFMQFLCKRK PNSTWSKVNK EKVQQLIAAE LMTPAGLESI ETAKRNGSWK
ILDEVEALII PEDLEKAFKA YSGSKAFFLS LSKSVRKTLL QWLVLAKRAE TRQKRITEIA
EHAGEKLKPK PFR