| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1717 |
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| Symbol | lepA |
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| ID | 4185493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2019312 |
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| End bp | 2021102 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638071716 |
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| Product | GTP-binding protein LepA |
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| Protein accession | YP_678326 |
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| Protein GI | 110638117 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0481] Membrane GTPase LepA |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000391378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.794394 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACA TTCGTAATTT CTGCATTATT GCACATATTG ACCACGGTAA AAGTACCTTG
GCAGACAGAC TATTAGAATT CACAAGTACA GTATCTAACC GGCAGATGCA GGCGCAGGTA
TTGGATGATA TGGATCTTGA AAGAGAACGC GGCATCACGA TTAAGAGCCA CGCGATCCAG
ATGAATTACA TCTATGAAGG ACAAAAATAT GTTTTGAACC TGATAGATAC ACCCGGTCAC
GTCGATTTTT CTTATGAAGT ATCCCGATCC ATTGCGGCCT GTGAAGGTGC ATTACTGATT
GTTGATGCTG CACAGGGTAT AGAAGCACAG ACAATATCAA ATTTATATTT AGCTCTGGAA
AATGATTTAG AAATCATTCC GGTGTTGAAT AAGATTGATT TACCCGGTGC CATGCCGGAA
GAAGTAAAAG ACCAGGTGGT TGAATTGTTA GGTTGTGACC GCGACAGCAT CATACCTGCC
AGCGGTAAAG AAGGAATCGG TATTTTTGAA ATTCTTGCAG CCATTATTCA ACGTATACCG
CCTCCTAAAG GAGACCCGAA AGCTCCGTTA CAGGCATTGA TATTTGACTC TCAGTTCAAT
TCATTCAGAG GTATTGAAGT TATGTTCCGT ATTTTCAACG GTACCATTAA AAAAGGAGAT
AAGGTTAAAT TCATAAACAT CGGCAAAGAA TACTATGCGG ATGAAATTGG TGTATTGAAA
TTACAGCAGG AACCGCAGCT TGAAATGAGT GCGGGTAATG TAGGGTATAT CATTTCAGGG
ATCAAAGAAG CGAAAGATGT TAAAGTAGGC GACACCATTA CACACGTAAG CAGACCGGGA
GAACCGATTC AGGGTTTTGC AGATGTGAAA CCAATGGTAT TTGCCGGTAT CTATCCGGTT
GAAACAAGTG AGTTTGAAGA CTTACGCGCA GCTATGGAAA AGCTTCAGCT GAATGACGCT
TCTCTGGTGT GGGAACCGGA AACATCCATC GCTCTCGGTT TTGGCTTCCG TTGCGGATTC
TTAGGAATGC TGCACATGGA GATTGTACAG GAGCGCCTGG AACGTGAATT TGATATGACA
GTGATCACAA CTGTTCCTTC GGTACAGTTC AAGGCTTATC TTACAAAGGG CAATGAGATG
GTTGTAGTAA ATGCACCTTC TGATATGCCT GAACCAACTA CATTGGATTA CATCGAAGAA
CCCTACATTA AAGCACAGAT CATTACCAAG GCTGATTTCG TTGGCCCTGT AATATCCTTG
TGTATGGATA AACGCGGTAT CATTACCAAT CAGACATACT TAACATCGGA TCGGGTTGAA
TTAACATTCG AGCTTCCGTT GGCAGAGATT GTATTTGACT TCTTCGACAA ATTAAAAACC
ATTTCTAAAG GCTACGCCTC TCTGGATTAT GAACTGATCG GTTTCCGGGA ATCCAATGTA
ATTAAACTGG ATATCATGCT GAATGGTGAG AAGGTAGATG CCTTGTCAGC GATCGTTCAC
CGTGATAAAG CCTATGATTG GGGCAAACGG TTGTGTGAAA AACTGAAAGA CCTGATCCCG
ATGCAGATGT TTGAGATTGC AGTGCAGGCT GCAATCGGAC AAAAAATCAT TGCCCGGGAG
ACAGTAAAAG CAATGCGCAA AAACGTATTG GCAAAATGTT ACGGCGGTGA TATCTCCCGT
AAAAGAAAGC TTCTTGAAAA GCAGAAAAAA GGGAAGAAAC GTATGCGCCA GGTTGGTAAC
GTCGAGATTC CGCAGGCAGC CTTCATGGCA ATCCTGAAAC TGGATCAATA G
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| Protein sequence | MENIRNFCII AHIDHGKSTL ADRLLEFTST VSNRQMQAQV LDDMDLERER GITIKSHAIQ
MNYIYEGQKY VLNLIDTPGH VDFSYEVSRS IAACEGALLI VDAAQGIEAQ TISNLYLALE
NDLEIIPVLN KIDLPGAMPE EVKDQVVELL GCDRDSIIPA SGKEGIGIFE ILAAIIQRIP
PPKGDPKAPL QALIFDSQFN SFRGIEVMFR IFNGTIKKGD KVKFINIGKE YYADEIGVLK
LQQEPQLEMS AGNVGYIISG IKEAKDVKVG DTITHVSRPG EPIQGFADVK PMVFAGIYPV
ETSEFEDLRA AMEKLQLNDA SLVWEPETSI ALGFGFRCGF LGMLHMEIVQ ERLEREFDMT
VITTVPSVQF KAYLTKGNEM VVVNAPSDMP EPTTLDYIEE PYIKAQIITK ADFVGPVISL
CMDKRGIITN QTYLTSDRVE LTFELPLAEI VFDFFDKLKT ISKGYASLDY ELIGFRESNV
IKLDIMLNGE KVDALSAIVH RDKAYDWGKR LCEKLKDLIP MQMFEIAVQA AIGQKIIARE
TVKAMRKNVL AKCYGGDISR KRKLLEKQKK GKKRMRQVGN VEIPQAAFMA ILKLDQ
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