| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1706 |
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| Symbol | clpP |
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| ID | 4185482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2007555 |
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| End bp | 2008244 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638071705 |
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| Product | ATP-dependent Clp protease proteolytic subunit ClpP |
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| Protein accession | YP_678315 |
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| Protein GI | 110638106 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.103444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.606412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCAATC AGAACGAATT CAGAAAATTT GCTGTAAAAG ATCAGGGAAT AAGCAGCCTT
GCCGTTGACA GCTATATCAA TCAGATTCAA AGCATTGCGC CAAATTATAT CGTAGGTATG
ACGCCAAATG TTGTTGAAGA GCGCCAGATG CGTGCAACAG TTATTGACGT TTTCTCTCGT
TTAATGGGTG ATCGTATTAT TTTCCTTGGA ACAGGGATTG ACGATTATGT AGCCAATGTA
GTAAATGCAC AGCTATTGTT TTTAGAATCA GTAGATCCTA AGAAAGATAT CATGATGTAT
ATTAACAGTC CGGGAGGCTC TGTATATGCA GGCTTAGGGA TCTATGACAC CATGCACTAT
ATCAATCCGG ATGTTTCTAC AACATGTGTT GGTCTTGCAG CTTCTATGGG TGCTGTTTTA
TTATGCGGCG GCGCGGCTAA AAAACGTTCC GCTCTTCCCC ATTCAAGAAT TATGATTCAC
CAGCCATTGG GTGGTGCTCA GGGACAGGCA TCTGATATTG AAATTACCGC ACGTGAAATA
TTGAAACTGA AGGGTGAGCT TTATGAAATT TTAGCGAAAC ATTCGGGTAA GGATATTGAA
ACGATCGAGA AGCATTCAGA CCGTGATTAC TGGTTGAAAG CTGCTGAAGC AAAAGAATAC
GGCATCATTG ATGAAGTATT GGTAAAATAA
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| Protein sequence | MINQNEFRKF AVKDQGISSL AVDSYINQIQ SIAPNYIVGM TPNVVEERQM RATVIDVFSR
LMGDRIIFLG TGIDDYVANV VNAQLLFLES VDPKKDIMMY INSPGGSVYA GLGIYDTMHY
INPDVSTTCV GLAASMGAVL LCGGAAKKRS ALPHSRIMIH QPLGGAQGQA SDIEITAREI
LKLKGELYEI LAKHSGKDIE TIEKHSDRDY WLKAAEAKEY GIIDEVLVK
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