Gene CHU_1699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1699 
Symbol 
ID4184924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1999400 
End bp1999990 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content35% 
IMG OID638071697 
Productsterol desaturase family protein 
Protein accessionYP_678308 
Protein GI110638099 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.844125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGATG GTTTATTAAC TACCTTCAAA GATGAAATTA CATTAAAAGA AATTGGCTGG 
ACCTGTTCAA CGATTTTTTT CAACACACTG GTTACACTGG CAGGCTATAA GCTTTTTCAA
CACGGCGTTA TTATTTTTCA TCTGAATTTT TCAGTAACAG AATTACTGGC AGACTTTTTA
CTATTGATCG TAGCAATGGA TTTTATGATG TATGTATTTC ATTGGGCGAT ACATAAATTA
CATGCCCTGT ACAGATATCA TGATCTGCAT CATCAGTACA ATAACCCAAC TGCTGTTTCT
TTATTTGTGT TACATCCTGT CGAAGTACTT GGTTTTGGAG GGCTTTGGTT ATGTCTGCTC
ACTGCCATAG ATTTTTCTAT TTATGCCATC ATACTTTATC TCATGTTTAA TGTTGCCATG
GGTATTATCG GACATTTACG TAAAGAATTC ATCCCCGCAA GCGTGAAAAA TCATACTTTT
TTTCAATGGC TCGCAAATAC TGGCTTCCAT GTAGACCATC ATCAGTACCA ACAATACAAT
TTCGGGTTTT ACACAAAAGT CTGGGATCGT ATTTTTGGAA CATTAAAATA G
 
Protein sequence
MLDGLLTTFK DEITLKEIGW TCSTIFFNTL VTLAGYKLFQ HGVIIFHLNF SVTELLADFL 
LLIVAMDFMM YVFHWAIHKL HALYRYHDLH HQYNNPTAVS LFVLHPVEVL GFGGLWLCLL
TAIDFSIYAI ILYLMFNVAM GIIGHLRKEF IPASVKNHTF FQWLANTGFH VDHHQYQQYN
FGFYTKVWDR IFGTLK