Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1699 |
Symbol | |
ID | 4184924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1999400 |
End bp | 1999990 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638071697 |
Product | sterol desaturase family protein |
Protein accession | YP_678308 |
Protein GI | 110638099 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3000] Sterol desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.844125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGATG GTTTATTAAC TACCTTCAAA GATGAAATTA CATTAAAAGA AATTGGCTGG ACCTGTTCAA CGATTTTTTT CAACACACTG GTTACACTGG CAGGCTATAA GCTTTTTCAA CACGGCGTTA TTATTTTTCA TCTGAATTTT TCAGTAACAG AATTACTGGC AGACTTTTTA CTATTGATCG TAGCAATGGA TTTTATGATG TATGTATTTC ATTGGGCGAT ACATAAATTA CATGCCCTGT ACAGATATCA TGATCTGCAT CATCAGTACA ATAACCCAAC TGCTGTTTCT TTATTTGTGT TACATCCTGT CGAAGTACTT GGTTTTGGAG GGCTTTGGTT ATGTCTGCTC ACTGCCATAG ATTTTTCTAT TTATGCCATC ATACTTTATC TCATGTTTAA TGTTGCCATG GGTATTATCG GACATTTACG TAAAGAATTC ATCCCCGCAA GCGTGAAAAA TCATACTTTT TTTCAATGGC TCGCAAATAC TGGCTTCCAT GTAGACCATC ATCAGTACCA ACAATACAAT TTCGGGTTTT ACACAAAAGT CTGGGATCGT ATTTTTGGAA CATTAAAATA G
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Protein sequence | MLDGLLTTFK DEITLKEIGW TCSTIFFNTL VTLAGYKLFQ HGVIIFHLNF SVTELLADFL LLIVAMDFMM YVFHWAIHKL HALYRYHDLH HQYNNPTAVS LFVLHPVEVL GFGGLWLCLL TAIDFSIYAI ILYLMFNVAM GIIGHLRKEF IPASVKNHTF FQWLANTGFH VDHHQYQQYN FGFYTKVWDR IFGTLK
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