Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1691 |
Symbol | yfeW |
ID | 4184917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1984574 |
End bp | 1985716 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638071687 |
Product | beta-lactamase |
Protein accession | YP_678301 |
Protein GI | 110638092 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00227097 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTGTTCA GAGTTCATTC ATTTATTTCA GTAAAATCAT TCAGACAATC CGTATTGTTT GGAATGATTG CATTGACTGT ATACAGCTGT ATGCCTATTC AGGCATATCG CTATATTGTC CCGGATGAGC AGGACGTTTA TCGATTTAAA TATGAAACCG TTAAACATGC CGATACGTGT TTTGAATTTA AAAAAGTTCC TGTAAAAAAA TCATTTGAAG TAGCAAACTG GACCTCAAAA GTACCTTTAA TAAAATTACC CCTGGATCAG TTTTTAAAAG AACAAAAAAC GAAATACTTT GTAGTTATTA AAAACGATAG TATCCTGTAT GAATATACAG ACAGGAAAAT AAAAAAATAC AATCCGGTTC CCTCCTTTTC AATATCCAAA TCGTTTGTAT CCGCATGTCT CGGAATAGCT ATCCAACAAG GGTATATAGG TTCTGTAAAT GATCGTGTAA CAGATTATTT GCCGGAACTC AATTATCATA AGAATTTTGA ATCCCTAACC ATCAACCATT TACTGAATCA AAAATCAGGC ATCAGAATGC GCGTTCCAAA TGTTGCAGAT GCTTATTATG GTAAAGTTGA AAATGTATTG CCTTATATCT ATTTTGACCA TAAGCCCGGT GAGCATTTTG AATACATTAA TATCAACTAC ACCTTATTGG GCTTAATCAT TGAACGTACA ACCAAACAGG ATCTGCATAA ATACTTCTCG GATAATATCT GGTCTAAAAT CGGCACCTGT GATTCTGCCG TATGGGGCTA TGATTATAAA ACCAAACATA CACGCGCAAT AGGCTGTTTC GCGGGTTCTG CAAGGGATTA TGCTAAATTC GGTATGCTGT ATCTAAATAA CGGCAGCTGG AAAGGAAACC AATTGATTGA TAGTAATTGG GTGAAGCAAT CTATTACTCC TGTAAATTCA TTGGGGGAAA ATGTAGGCTA CAACAACAGC TGGTTTATCG GAGAAAAAGA AGTTGGAGAT TATATGGCTC TTGGTATGTA TAGACAGCAG ATTTACATTA ATCCTGAAAA TAACGTTGTC ATTGTTTCCT TAATGAAATT CAACAAAGAA AACCTCGACT TACGCTGGTG GCAAATATTG AGACAAGTTA CAGAACAAAC AAAATCTAAC TGA
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Protein sequence | MLFRVHSFIS VKSFRQSVLF GMIALTVYSC MPIQAYRYIV PDEQDVYRFK YETVKHADTC FEFKKVPVKK SFEVANWTSK VPLIKLPLDQ FLKEQKTKYF VVIKNDSILY EYTDRKIKKY NPVPSFSISK SFVSACLGIA IQQGYIGSVN DRVTDYLPEL NYHKNFESLT INHLLNQKSG IRMRVPNVAD AYYGKVENVL PYIYFDHKPG EHFEYININY TLLGLIIERT TKQDLHKYFS DNIWSKIGTC DSAVWGYDYK TKHTRAIGCF AGSARDYAKF GMLYLNNGSW KGNQLIDSNW VKQSITPVNS LGENVGYNNS WFIGEKEVGD YMALGMYRQQ IYINPENNVV IVSLMKFNKE NLDLRWWQIL RQVTEQTKSN
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