Gene CHU_1691 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1691 
SymbolyfeW 
ID4184917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1984574 
End bp1985716 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content35% 
IMG OID638071687 
Productbeta-lactamase 
Protein accessionYP_678301 
Protein GI110638092 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00227097 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTGTTCA GAGTTCATTC ATTTATTTCA GTAAAATCAT TCAGACAATC CGTATTGTTT 
GGAATGATTG CATTGACTGT ATACAGCTGT ATGCCTATTC AGGCATATCG CTATATTGTC
CCGGATGAGC AGGACGTTTA TCGATTTAAA TATGAAACCG TTAAACATGC CGATACGTGT
TTTGAATTTA AAAAAGTTCC TGTAAAAAAA TCATTTGAAG TAGCAAACTG GACCTCAAAA
GTACCTTTAA TAAAATTACC CCTGGATCAG TTTTTAAAAG AACAAAAAAC GAAATACTTT
GTAGTTATTA AAAACGATAG TATCCTGTAT GAATATACAG ACAGGAAAAT AAAAAAATAC
AATCCGGTTC CCTCCTTTTC AATATCCAAA TCGTTTGTAT CCGCATGTCT CGGAATAGCT
ATCCAACAAG GGTATATAGG TTCTGTAAAT GATCGTGTAA CAGATTATTT GCCGGAACTC
AATTATCATA AGAATTTTGA ATCCCTAACC ATCAACCATT TACTGAATCA AAAATCAGGC
ATCAGAATGC GCGTTCCAAA TGTTGCAGAT GCTTATTATG GTAAAGTTGA AAATGTATTG
CCTTATATCT ATTTTGACCA TAAGCCCGGT GAGCATTTTG AATACATTAA TATCAACTAC
ACCTTATTGG GCTTAATCAT TGAACGTACA ACCAAACAGG ATCTGCATAA ATACTTCTCG
GATAATATCT GGTCTAAAAT CGGCACCTGT GATTCTGCCG TATGGGGCTA TGATTATAAA
ACCAAACATA CACGCGCAAT AGGCTGTTTC GCGGGTTCTG CAAGGGATTA TGCTAAATTC
GGTATGCTGT ATCTAAATAA CGGCAGCTGG AAAGGAAACC AATTGATTGA TAGTAATTGG
GTGAAGCAAT CTATTACTCC TGTAAATTCA TTGGGGGAAA ATGTAGGCTA CAACAACAGC
TGGTTTATCG GAGAAAAAGA AGTTGGAGAT TATATGGCTC TTGGTATGTA TAGACAGCAG
ATTTACATTA ATCCTGAAAA TAACGTTGTC ATTGTTTCCT TAATGAAATT CAACAAAGAA
AACCTCGACT TACGCTGGTG GCAAATATTG AGACAAGTTA CAGAACAAAC AAAATCTAAC
TGA
 
Protein sequence
MLFRVHSFIS VKSFRQSVLF GMIALTVYSC MPIQAYRYIV PDEQDVYRFK YETVKHADTC 
FEFKKVPVKK SFEVANWTSK VPLIKLPLDQ FLKEQKTKYF VVIKNDSILY EYTDRKIKKY
NPVPSFSISK SFVSACLGIA IQQGYIGSVN DRVTDYLPEL NYHKNFESLT INHLLNQKSG
IRMRVPNVAD AYYGKVENVL PYIYFDHKPG EHFEYININY TLLGLIIERT TKQDLHKYFS
DNIWSKIGTC DSAVWGYDYK TKHTRAIGCF AGSARDYAKF GMLYLNNGSW KGNQLIDSNW
VKQSITPVNS LGENVGYNNS WFIGEKEVGD YMALGMYRQQ IYINPENNVV IVSLMKFNKE
NLDLRWWQIL RQVTEQTKSN