Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1686 |
Symbol | |
ID | 4184912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1977280 |
End bp | 1978020 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638071682 |
Product | fatty-acid desaturase |
Protein accession | YP_678296 |
Protein GI | 110638087 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1398] Fatty-acid desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.726488 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATAT TTGCCTTTCT TGTAATCCAC TGGTACGTTT CCTTGTTTTT TCAATCCGTA TTCCACCATC GATATTCTGC TCACGGTATT TTCACGATGT CCAAAACATG GGAAAAAATC TTTTATGTAG GCTGCTTTAT TGCTCAGGGT TCTTCCTATA TCAGTGCGAA TGCTTATGGT AAACTGCACC GTTTGCACCA TGCCCATACC GATACGCCTG AAGATCCGCA CTCTCCGCAA AACTCATCCA ATGCCTTAAT GATGATGTGG GAAACACGTA ATAATTACAT TGATGTATAT ACAGGAAAAA CACCTGTTGA TGAACGCTTC ACAAAAAATT TACCCGACTG GCCGGTATTT GAAAAATACG CGCATACGTT CTATACACGT TTTGCATGGA TCTTTTTATA CGTTTTGTTT TACGTAGAAT TTGCTACCGC CTGGTGGATG TTCTTATTTC TTCCGGTCAC TATTCTTATG GGCTCCATAC AAGGTGTTGC TGTAAACTGG TGGGCACATA AATTTGGGTA TGTAAACTGC AAAGTAAACA ATACATCTAA AAATATACTG CCGATAGATG TGATATTCTG GGGAGAATCG TTTCACAACA ATCACCATGC AAACCCCCAG AATCCCAACA ATTCGATTAA ATGGTTTGAA TTTGATTCCG GATATCAAAT GATGCGTTTT CTGAATATGA TGCGTATTAT TAAACTCAAA CCCTATTATT CAGTGCTTTA A
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Protein sequence | MIIFAFLVIH WYVSLFFQSV FHHRYSAHGI FTMSKTWEKI FYVGCFIAQG SSYISANAYG KLHRLHHAHT DTPEDPHSPQ NSSNALMMMW ETRNNYIDVY TGKTPVDERF TKNLPDWPVF EKYAHTFYTR FAWIFLYVLF YVEFATAWWM FLFLPVTILM GSIQGVAVNW WAHKFGYVNC KVNNTSKNIL PIDVIFWGES FHNNHHANPQ NPNNSIKWFE FDSGYQMMRF LNMMRIIKLK PYYSVL
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