Gene CHU_1686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1686 
Symbol 
ID4184912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1977280 
End bp1978020 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content39% 
IMG OID638071682 
Productfatty-acid desaturase 
Protein accessionYP_678296 
Protein GI110638087 
COG category[I] Lipid transport and metabolism 
COG ID[COG1398] Fatty-acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.726488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATAT TTGCCTTTCT TGTAATCCAC TGGTACGTTT CCTTGTTTTT TCAATCCGTA 
TTCCACCATC GATATTCTGC TCACGGTATT TTCACGATGT CCAAAACATG GGAAAAAATC
TTTTATGTAG GCTGCTTTAT TGCTCAGGGT TCTTCCTATA TCAGTGCGAA TGCTTATGGT
AAACTGCACC GTTTGCACCA TGCCCATACC GATACGCCTG AAGATCCGCA CTCTCCGCAA
AACTCATCCA ATGCCTTAAT GATGATGTGG GAAACACGTA ATAATTACAT TGATGTATAT
ACAGGAAAAA CACCTGTTGA TGAACGCTTC ACAAAAAATT TACCCGACTG GCCGGTATTT
GAAAAATACG CGCATACGTT CTATACACGT TTTGCATGGA TCTTTTTATA CGTTTTGTTT
TACGTAGAAT TTGCTACCGC CTGGTGGATG TTCTTATTTC TTCCGGTCAC TATTCTTATG
GGCTCCATAC AAGGTGTTGC TGTAAACTGG TGGGCACATA AATTTGGGTA TGTAAACTGC
AAAGTAAACA ATACATCTAA AAATATACTG CCGATAGATG TGATATTCTG GGGAGAATCG
TTTCACAACA ATCACCATGC AAACCCCCAG AATCCCAACA ATTCGATTAA ATGGTTTGAA
TTTGATTCCG GATATCAAAT GATGCGTTTT CTGAATATGA TGCGTATTAT TAAACTCAAA
CCCTATTATT CAGTGCTTTA A
 
Protein sequence
MIIFAFLVIH WYVSLFFQSV FHHRYSAHGI FTMSKTWEKI FYVGCFIAQG SSYISANAYG 
KLHRLHHAHT DTPEDPHSPQ NSSNALMMMW ETRNNYIDVY TGKTPVDERF TKNLPDWPVF
EKYAHTFYTR FAWIFLYVLF YVEFATAWWM FLFLPVTILM GSIQGVAVNW WAHKFGYVNC
KVNNTSKNIL PIDVIFWGES FHNNHHANPQ NPNNSIKWFE FDSGYQMMRF LNMMRIIKLK
PYYSVL