| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1683 |
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| Symbol | rfaQ |
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| ID | 4184909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1974117 |
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| End bp | 1975136 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638071679 |
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| Product | heptosyltransferase family protein |
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| Protein accession | YP_678293 |
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| Protein GI | 110638084 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.943397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAGA ACAGTATCAG ATTGGAGAAA ATACTTGTTA TTCAAACGGC ATTTATCGGT
GATGCTATTT TAGCTACCGC GCTGCTGGAG TCTATTCATC AGTCGCTGCC GGATGCTGAC
ATCGATATAC TGGTTCGGAA AGGGAATGAG TCGCTGTTTC AGCAGCATCC GTTTTTAAAA
CAGGTATTGA TCTGGGATAA AAAACAATCA AAGTATAAAA ATCTTTTTGG CTTGCTTTCA
AGCATCCGTT CTACTAAATA CGACCTGGTT ATTAATCTGC AGCGCTTTGG TGCTACCGGT
TTTCTTACGG CATTTTCAGG TGCGGGCATA ACAGTAGGGT ATGATAAAAA TCCATTTTCA
TTTTTATTTA CAAAGAAATT CAGTCATGAT CTGGATAAAG GGTTACATGA AGTTGACCGG
AACAATACGT TGGTTTCCTG GTTTGCTTCA ACATTAAAAA GACAACCCAA ACTTTATCCG
ACACAGCAAC ACTATGAACG GGTAGAAGTG CATACGCAGA AAGCATTCAT TTGTGTTGCG
CCTAATTCTG TATGGTTTAC CAAGCAATAT CCGGAACATA AGTGGGTGGA ATTTTTAAAT
CAGGTTCCAT CCGTGTATAC CATTTATTTA TTGGGAGCGC CGGGCGATGC GGTAAGCTGC
CAACGAATAA AAGATCAGAT CATAACAGGT AATACCGTTG AGATTCTTGC CGGTAAATTA
TCCTTTTTAG AATCTGCTGC ACTGATGGAA AAAGCAGCGA TGAATTATGT AAATGATTCG
GCACCGATGC ATATTGCTTC CTCTATGAAT GCACCTGTTG CTGCTGTGTT TTGCTCTACC
GTTCCGGGTT TTGGTTTCGG CCCGCTATCC GACAAATCAT TTAACATCGA AACGACGGAG
AAACTTAGTT GCAGGCCTTG CGGGCTGCAT GGATATAAAG CGTGTCCGGA GGGGCATTTT
AAATGTGCGC AGACGATCGG GAAGGAGCAG TTTTTAGAGG TTTTAAGTAA TAGGTTCTAA
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| Protein sequence | MKKNSIRLEK ILVIQTAFIG DAILATALLE SIHQSLPDAD IDILVRKGNE SLFQQHPFLK
QVLIWDKKQS KYKNLFGLLS SIRSTKYDLV INLQRFGATG FLTAFSGAGI TVGYDKNPFS
FLFTKKFSHD LDKGLHEVDR NNTLVSWFAS TLKRQPKLYP TQQHYERVEV HTQKAFICVA
PNSVWFTKQY PEHKWVEFLN QVPSVYTIYL LGAPGDAVSC QRIKDQIITG NTVEILAGKL
SFLESAALME KAAMNYVNDS APMHIASSMN APVAAVFCST VPGFGFGPLS DKSFNIETTE
KLSCRPCGLH GYKACPEGHF KCAQTIGKEQ FLEVLSNRF
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