Gene CHU_1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1682 
SymbolgyrA 
ID4186543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1970665 
End bp1973262 
Gene Length2598 bp 
Protein Length865 aa 
Translation table11 
GC content44% 
IMG OID638071676 
ProductDNA gyrase subunit A 
Protein accessionYP_678292 
Protein GI110638083 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGATC AACCTATTTC AGGCGGTACA AACATCATCC CAATAAATAT TGAGGATGAA 
ATGAGAGGTG CTTACATCGA TTATTCCATG TCTGTAATTG TTTCAAGAGC ATTACCGGAT
GTACGCGATG GTTTAAAGCC AGTTCACCGC CGGGTGTTAT ATGGAATGGA AGATTTAGGT
GTACATTACA ATAAAGCCTA TAAAAAATCT GCCAGAATTG TCGGAGAGGT ATTGGGTAAG
TATCATCCGC ACGGTGACTC ATCTGTATAC GATACCATGG TTCGTATGGC TCAGGAATGG
TCGCTGCGCT ATCCAATGGT CGACGGACAG GGGAACTTCG GTTCTGTCGA TGGTGATTCG
CCCGCTGCCA TGCGTTATAC CGAAGCTCGT TTAAAGCGTA TCGCCGAAGA AATGCTTTCG
GACATCAATA AAGATACGGT TGATTTCCAG CCCAACTTTG ATGACTCGTT ACAGGAGCCA
TCTGTACTTC CTTCAAAAGT TCCCAATTTA TTAATAAACG GTTCTTCCGG TATTGCCGTT
GGTATGGCTA CCAACATGGC GCCCCATAAC ATCACAGAAG TGATTGACGG TGTGATCGCG
TTTATTGACA ACAACGATAT TACCATTCCT GAACTGATGG TGCATGTAAA AGGTCCGGAT
TTCCCGACCG GTGCAACCAT TTACGGTTAC CAGGGCATAC GTTCTGCGTT CGAAACAGGC
AGAGGCCGTA TCGTACTCCG TTCCCGCTCA ACCATTGAAA CAACATCTAC CGGAAAAGAA
CAGATCATCG TTTCTGAAAT TCCATATATG GTGAACAAAG CTGCCATGAT TGAAAAGATC
GCAGCGATGG TGAACGAAAA GAAAATCGAA GGCATCAGCG ATATCCGTGA TGAATCGGAT
AGAGAAGGGA TGCGTATCGT ATTCGATCTG AAAAGAGATG CAATCGCAAA CGTTGTACTG
AACAACTTAT TTAAATATTC TCAGCTGCAG TCTTCTTTCA GTGTAAACAA CGTGTGTCTG
GTTAAAGGAC GCCCGATGAC CCTGAACCTG AAAGAAATGA TTATGTATTT CGTTGAACAC
CGTCACGAGG TTGTTACACG CCGTACACAA TTCGAATTGA ATGAAGCGGA AAAAAGAGCC
CACATTTTAC AGGGTTACTT AATCGCGTTA GATCACCTGG ATGAAGTAAT TAAGCTGATC
CGTGAATCCC GTGATCCGGA AGCAGCCCGT ATCGGTTTGA TGACAAACTT CGGTATGTCT
GAGATTCAGG CGAAAGCGGT ACTTGACTTA AGGCTGCAAC GTCTTACAGG CATGGAGCGC
GACAAGATCA TTAAGGAATA TGAAGAGATC ATGGCGCTGA TCAACCGGTT GAAAGAAATC
CTTGCGAGTA AAGAACTTCG CATGGAGATC ATCAAACAGG AACTGGACGA AATGAAGGAA
CGCTACGGAG ATAAACGCAG ATCTGACATT GTTCACGCTT CTGATGATAT CAATATTGAA
GATATGATTC CGGAAGAGCA AATGGTAATC ACGATTTCTC ATGAAGGATA CATTAAACGT
ACTGCTCTGT CTGAATACAG AACACAAGGC AGAGGCGGCG TTGGCTCTAA AGGAGCAGGT
TCAAAAGAAT CTGACTTTAC AGAACATTTA TTTGTAGCAT CTACTCATAA TTATTTATTG
TTCTTTACAG AATACGGTAA AGTATTCTGG TTAAAAGTAT ACGAAATCCC TGAAGGAGGC
AAGACTACAA AAGGCCGTGC GATTCAGAAC GTTATTCAGA TTGAACCAGG TGATAAAGTA
CGTACCGTAA TTAATGTTAA AACATTAACA GACGACGATT ATATCAATAA CAATTACCTT
GTTATGTGTA CCGAACAAGG TGTGATTAAG AAAACAACAC TTGAAGCGTA TTCAAGACCA
CGTTCCGGCG GTATCAATGC CATTACCATC CACGAAGGTG ACCGTTTGCT GGATGTGAAA
ATGACATCAG GCAGCGATGA ATTGGTCATT GCACTTCGTT CAGGCAGAGC CATCCGTTTC
AACGAAAGCA AAGTTCGTCC GATGGGAAGA ACAGCAGCAG GTGTGAAAGG GGTAACACTG
GCACACGATA AAGATGTGGT TGTTGGTCTG GTTGCCGTAA GTTCTCCGGA TACTACTTTG
CTGGTCGTTT CAGAAAAAGG GTACGGAAAA CGCTCGGATA TAGAAGATTA CCGTGTAACA
AACAGAGGGG GCAAAGGTGT GAAAACATTG AACATCTCTG AAAAAACCGG TGACCTTGTC
AGTATTCTTG GTGTGAACGA TCAGTATCAG ATCATGATCA TCAATAAATC CGGTATTACA
ATCCGTATGG CTGTATCCGA TCTGCGTGTA ATGGGCAGAG CAACGCAAGG TGTTCGTCTG
ATCAAAATTC AGGATGGAGA CTCTATTGCT TCTGTAGCGA AGTTCGAATT TACGGATATT
ATCGATGAAG AAGGTGGTGA ATTAGCGAAA CCGGATCTGG GAGACGTGAT CGTTGCCGAA
GAAGGTGCTG CAGACGAGGC TGAGGATGAA ACAGAAGAAG ATGCTGCGGA AGATTCTACC
GAAGAATCAC CTGAATAA
 
Protein sequence
MSDQPISGGT NIIPINIEDE MRGAYIDYSM SVIVSRALPD VRDGLKPVHR RVLYGMEDLG 
VHYNKAYKKS ARIVGEVLGK YHPHGDSSVY DTMVRMAQEW SLRYPMVDGQ GNFGSVDGDS
PAAMRYTEAR LKRIAEEMLS DINKDTVDFQ PNFDDSLQEP SVLPSKVPNL LINGSSGIAV
GMATNMAPHN ITEVIDGVIA FIDNNDITIP ELMVHVKGPD FPTGATIYGY QGIRSAFETG
RGRIVLRSRS TIETTSTGKE QIIVSEIPYM VNKAAMIEKI AAMVNEKKIE GISDIRDESD
REGMRIVFDL KRDAIANVVL NNLFKYSQLQ SSFSVNNVCL VKGRPMTLNL KEMIMYFVEH
RHEVVTRRTQ FELNEAEKRA HILQGYLIAL DHLDEVIKLI RESRDPEAAR IGLMTNFGMS
EIQAKAVLDL RLQRLTGMER DKIIKEYEEI MALINRLKEI LASKELRMEI IKQELDEMKE
RYGDKRRSDI VHASDDINIE DMIPEEQMVI TISHEGYIKR TALSEYRTQG RGGVGSKGAG
SKESDFTEHL FVASTHNYLL FFTEYGKVFW LKVYEIPEGG KTTKGRAIQN VIQIEPGDKV
RTVINVKTLT DDDYINNNYL VMCTEQGVIK KTTLEAYSRP RSGGINAITI HEGDRLLDVK
MTSGSDELVI ALRSGRAIRF NESKVRPMGR TAAGVKGVTL AHDKDVVVGL VAVSSPDTTL
LVVSEKGYGK RSDIEDYRVT NRGGKGVKTL NISEKTGDLV SILGVNDQYQ IMIINKSGIT
IRMAVSDLRV MGRATQGVRL IKIQDGDSIA SVAKFEFTDI IDEEGGELAK PDLGDVIVAE
EGAADEAEDE TEEDAAEDST EESPE