Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1682 |
Symbol | gyrA |
ID | 4186543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1970665 |
End bp | 1973262 |
Gene Length | 2598 bp |
Protein Length | 865 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638071676 |
Product | DNA gyrase subunit A |
Protein accession | YP_678292 |
Protein GI | 110638083 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGATC AACCTATTTC AGGCGGTACA AACATCATCC CAATAAATAT TGAGGATGAA ATGAGAGGTG CTTACATCGA TTATTCCATG TCTGTAATTG TTTCAAGAGC ATTACCGGAT GTACGCGATG GTTTAAAGCC AGTTCACCGC CGGGTGTTAT ATGGAATGGA AGATTTAGGT GTACATTACA ATAAAGCCTA TAAAAAATCT GCCAGAATTG TCGGAGAGGT ATTGGGTAAG TATCATCCGC ACGGTGACTC ATCTGTATAC GATACCATGG TTCGTATGGC TCAGGAATGG TCGCTGCGCT ATCCAATGGT CGACGGACAG GGGAACTTCG GTTCTGTCGA TGGTGATTCG CCCGCTGCCA TGCGTTATAC CGAAGCTCGT TTAAAGCGTA TCGCCGAAGA AATGCTTTCG GACATCAATA AAGATACGGT TGATTTCCAG CCCAACTTTG ATGACTCGTT ACAGGAGCCA TCTGTACTTC CTTCAAAAGT TCCCAATTTA TTAATAAACG GTTCTTCCGG TATTGCCGTT GGTATGGCTA CCAACATGGC GCCCCATAAC ATCACAGAAG TGATTGACGG TGTGATCGCG TTTATTGACA ACAACGATAT TACCATTCCT GAACTGATGG TGCATGTAAA AGGTCCGGAT TTCCCGACCG GTGCAACCAT TTACGGTTAC CAGGGCATAC GTTCTGCGTT CGAAACAGGC AGAGGCCGTA TCGTACTCCG TTCCCGCTCA ACCATTGAAA CAACATCTAC CGGAAAAGAA CAGATCATCG TTTCTGAAAT TCCATATATG GTGAACAAAG CTGCCATGAT TGAAAAGATC GCAGCGATGG TGAACGAAAA GAAAATCGAA GGCATCAGCG ATATCCGTGA TGAATCGGAT AGAGAAGGGA TGCGTATCGT ATTCGATCTG AAAAGAGATG CAATCGCAAA CGTTGTACTG AACAACTTAT TTAAATATTC TCAGCTGCAG TCTTCTTTCA GTGTAAACAA CGTGTGTCTG GTTAAAGGAC GCCCGATGAC CCTGAACCTG AAAGAAATGA TTATGTATTT CGTTGAACAC CGTCACGAGG TTGTTACACG CCGTACACAA TTCGAATTGA ATGAAGCGGA AAAAAGAGCC CACATTTTAC AGGGTTACTT AATCGCGTTA GATCACCTGG ATGAAGTAAT TAAGCTGATC CGTGAATCCC GTGATCCGGA AGCAGCCCGT ATCGGTTTGA TGACAAACTT CGGTATGTCT GAGATTCAGG CGAAAGCGGT ACTTGACTTA AGGCTGCAAC GTCTTACAGG CATGGAGCGC GACAAGATCA TTAAGGAATA TGAAGAGATC ATGGCGCTGA TCAACCGGTT GAAAGAAATC CTTGCGAGTA AAGAACTTCG CATGGAGATC ATCAAACAGG AACTGGACGA AATGAAGGAA CGCTACGGAG ATAAACGCAG ATCTGACATT GTTCACGCTT CTGATGATAT CAATATTGAA GATATGATTC CGGAAGAGCA AATGGTAATC ACGATTTCTC ATGAAGGATA CATTAAACGT ACTGCTCTGT CTGAATACAG AACACAAGGC AGAGGCGGCG TTGGCTCTAA AGGAGCAGGT TCAAAAGAAT CTGACTTTAC AGAACATTTA TTTGTAGCAT CTACTCATAA TTATTTATTG TTCTTTACAG AATACGGTAA AGTATTCTGG TTAAAAGTAT ACGAAATCCC TGAAGGAGGC AAGACTACAA AAGGCCGTGC GATTCAGAAC GTTATTCAGA TTGAACCAGG TGATAAAGTA CGTACCGTAA TTAATGTTAA AACATTAACA GACGACGATT ATATCAATAA CAATTACCTT GTTATGTGTA CCGAACAAGG TGTGATTAAG AAAACAACAC TTGAAGCGTA TTCAAGACCA CGTTCCGGCG GTATCAATGC CATTACCATC CACGAAGGTG ACCGTTTGCT GGATGTGAAA ATGACATCAG GCAGCGATGA ATTGGTCATT GCACTTCGTT CAGGCAGAGC CATCCGTTTC AACGAAAGCA AAGTTCGTCC GATGGGAAGA ACAGCAGCAG GTGTGAAAGG GGTAACACTG GCACACGATA AAGATGTGGT TGTTGGTCTG GTTGCCGTAA GTTCTCCGGA TACTACTTTG CTGGTCGTTT CAGAAAAAGG GTACGGAAAA CGCTCGGATA TAGAAGATTA CCGTGTAACA AACAGAGGGG GCAAAGGTGT GAAAACATTG AACATCTCTG AAAAAACCGG TGACCTTGTC AGTATTCTTG GTGTGAACGA TCAGTATCAG ATCATGATCA TCAATAAATC CGGTATTACA ATCCGTATGG CTGTATCCGA TCTGCGTGTA ATGGGCAGAG CAACGCAAGG TGTTCGTCTG ATCAAAATTC AGGATGGAGA CTCTATTGCT TCTGTAGCGA AGTTCGAATT TACGGATATT ATCGATGAAG AAGGTGGTGA ATTAGCGAAA CCGGATCTGG GAGACGTGAT CGTTGCCGAA GAAGGTGCTG CAGACGAGGC TGAGGATGAA ACAGAAGAAG ATGCTGCGGA AGATTCTACC GAAGAATCAC CTGAATAA
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Protein sequence | MSDQPISGGT NIIPINIEDE MRGAYIDYSM SVIVSRALPD VRDGLKPVHR RVLYGMEDLG VHYNKAYKKS ARIVGEVLGK YHPHGDSSVY DTMVRMAQEW SLRYPMVDGQ GNFGSVDGDS PAAMRYTEAR LKRIAEEMLS DINKDTVDFQ PNFDDSLQEP SVLPSKVPNL LINGSSGIAV GMATNMAPHN ITEVIDGVIA FIDNNDITIP ELMVHVKGPD FPTGATIYGY QGIRSAFETG RGRIVLRSRS TIETTSTGKE QIIVSEIPYM VNKAAMIEKI AAMVNEKKIE GISDIRDESD REGMRIVFDL KRDAIANVVL NNLFKYSQLQ SSFSVNNVCL VKGRPMTLNL KEMIMYFVEH RHEVVTRRTQ FELNEAEKRA HILQGYLIAL DHLDEVIKLI RESRDPEAAR IGLMTNFGMS EIQAKAVLDL RLQRLTGMER DKIIKEYEEI MALINRLKEI LASKELRMEI IKQELDEMKE RYGDKRRSDI VHASDDINIE DMIPEEQMVI TISHEGYIKR TALSEYRTQG RGGVGSKGAG SKESDFTEHL FVASTHNYLL FFTEYGKVFW LKVYEIPEGG KTTKGRAIQN VIQIEPGDKV RTVINVKTLT DDDYINNNYL VMCTEQGVIK KTTLEAYSRP RSGGINAITI HEGDRLLDVK MTSGSDELVI ALRSGRAIRF NESKVRPMGR TAAGVKGVTL AHDKDVVVGL VAVSSPDTTL LVVSEKGYGK RSDIEDYRVT NRGGKGVKTL NISEKTGDLV SILGVNDQYQ IMIINKSGIT IRMAVSDLRV MGRATQGVRL IKIQDGDSIA SVAKFEFTDI IDEEGGELAK PDLGDVIVAE EGAADEAEDE TEEDAAEDST EESPE
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