| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1680 |
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| Symbol | dnaQ |
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| ID | 4186541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1967687 |
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| End bp | 1969036 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638071674 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_678290 |
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| Protein GI | 110638081 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex
[COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.420679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGTATT CGATCATTGA TATTGAAACA ACCGGCGGAC ATGCTTCGGG AAACCGGATC
ATTGAGATTG CAATCTATAA GTTTGATGGA GAAAAAATAA CCGATACTTA TCAGACGCTG
ATCAATCCGG AGCGTCGCAT TCCTGTATTT ATAACTTCCT TAACAGGCAT TGATACTGAA
ATGGTAGCCG ATGCCCCGGT CTTTGCAGAT GTTGCACGGG AAATCACAGA CTTTACCAGA
GACAGTGTTT TTGTTGCACA TAATGTCAAT TTCGATTATA CGTTCGTAAA GAAAGAACTG
CAGGCACTTA ACATGCCATA CAATCTGCCG AAACTGTGTA CCGTTCGTTT GAGCCGGAAA
ATTTTCCCCG GACTACCCTC CTACAGTCTT GGTAATCTAT GCGGCAGCCT GGGTATTGAT
GTACAGAACA GACACCGCGC GGCAGGTGAT GCAGAAGCAA CGGTGAGGCT TCTGAATAAA
CTATTATTAA ATGATACAGA AGGATTTATA CCAAAGTCTT TAAAGAAAAA TTCGAAGGAA
ACGTTACTGC CTGCAAACCT GCCGCGCGAG CAGTTTGATG CACTGCCGGA AACGTTTGGT
GTGTATTATT TTCACGATCA TAAAGGCAAA GTGATCTATG TAGGCAAAGC CAATAACATC
AAAAAACGTG TCATCAGCCA CTTTTCCGGC AAACAGCAGA ATCAGAAAAG CCAGCAGTTT
ATGCAGGCCA TATACGGACT GAGTTATGAA GTATGCGGCA GCGAGTTATT GTCTTTGCTG
CTGGAATCCC ATGAGATCAA AAAATATTTC CCGGTCTATA ACAGCATTCA GAAATTCGGC
GAAAAGAATT ACGGCATTTA TCAGTATGAA GATAATGCCG GTTTCATCCG CTTATCCATC
GCCAAAGTAA ACAAACTTCA GCACCCGCTT ATTTCTTTCA GATACATCAG CGAAGCACGT
ACATTTCTGT TGGAAAAAGT GCGCACGTTT CAATTGTGTC ACCGCCGCAG CGGTTTACAG
ACTGCTCCCT GTTCAGACGT TGAATTGTGT ACCGCCTGTA AAGGCACAAC AAGAAGCACC
GCGTATAATG TAAAGATGAA ACGCGCCCTG GCAACGTTTG AGCATCCGGA TCACAGTTAC
ATCATTAAAC AGCCGGGCCG CACACGAGAT GAATATGCGG TAATTGTTGT TGAAGCAGGC
CGTTACCTGG GCTATGCCTA CATACCAGCT GATCTGTCAG GATCAACTAT TGAGGAACTG
AAACCTTTTG TTAACCGCCA TCCGGATAAC CGCGACATCC AGAAGATTTT AGCCATGCAT
CAACGGAAAA GTATGGTTAT TGCTGTTTAG
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| Protein sequence | MMYSIIDIET TGGHASGNRI IEIAIYKFDG EKITDTYQTL INPERRIPVF ITSLTGIDTE
MVADAPVFAD VAREITDFTR DSVFVAHNVN FDYTFVKKEL QALNMPYNLP KLCTVRLSRK
IFPGLPSYSL GNLCGSLGID VQNRHRAAGD AEATVRLLNK LLLNDTEGFI PKSLKKNSKE
TLLPANLPRE QFDALPETFG VYYFHDHKGK VIYVGKANNI KKRVISHFSG KQQNQKSQQF
MQAIYGLSYE VCGSELLSLL LESHEIKKYF PVYNSIQKFG EKNYGIYQYE DNAGFIRLSI
AKVNKLQHPL ISFRYISEAR TFLLEKVRTF QLCHRRSGLQ TAPCSDVELC TACKGTTRST
AYNVKMKRAL ATFEHPDHSY IIKQPGRTRD EYAVIVVEAG RYLGYAYIPA DLSGSTIEEL
KPFVNRHPDN RDIQKILAMH QRKSMVIAV
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