Gene CHU_1661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1661 
Symbolgdh 
ID4183378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1947858 
End bp1948664 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content46% 
IMG OID638071655 
Productglucose 1-dehydrogenase 
Protein accessionYP_678271 
Protein GI110638062 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.218295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAGT TAAAATTAAA AGGCCAGACT GCCCTTATCA CAGGCGGGGA TTCCGGCATA 
GGAAAAGGCA TTGCGTTAAA AATGGCTGCT GCAGGCGCCA ATATTCTTGT TAACTACAAC
TCAGATAAAG ACGCCGCAGA AGAAACCGTT GCACAATTGA AGGTACTGGG CGCTTCTGCC
ATCTGCTATC AAGCTGATGT AAGTGATGAA GCTGATGTAC AGAATATGTT CAGGGAAGCA
GTCAAACACT TTGGCACCAT TGATATATTG GTAAACAATG CCGGCCTTCA GCAGGACGCA
GCGTTCGTTG ACATGACATT GAAGCAGTGG AACAAAGTGA TCAGTGTAAA TCTTACGGGT
CAGTTTTTAT GCGCACGTGA AGCGGTGCGT GAGTTTACAA AAAGAGGTGC ACGTCCGGAG
ATCTCAAAAG CATTGGGCAA GATCATCTGC ATCAGTTCTG TTCACGAAGT AATTCCATGG
GGCGGACATG TAAATTATGC AGCATCTAAA GGCGGCATCA TGATGTTAAT GAAATCCATG
GCGCAGGAAT TAGGCGGATT AAAAATACGT ATTAACAGCA TCGGACCGGG TGCCATAAAA
ACGGATATCA ACAATGAGGC CTGGGAAACA CCGGAAGCAG CGGAAAAATT ATTAAAACTG
ATTCCATACA ACCGTATCGG TGAGACCGAA GATATCGGTA ACGTGGCTGT GTGGCTGGCA
TCAGACGAGT CAGACTATGT GCATGGCACT ACCTTGTTTG TGGATGGCGG CATGACACTC
TACCCGGGTT TTGCATCAAA TGGATAA
 
Protein sequence
MSELKLKGQT ALITGGDSGI GKGIALKMAA AGANILVNYN SDKDAAEETV AQLKVLGASA 
ICYQADVSDE ADVQNMFREA VKHFGTIDIL VNNAGLQQDA AFVDMTLKQW NKVISVNLTG
QFLCAREAVR EFTKRGARPE ISKALGKIIC ISSVHEVIPW GGHVNYAASK GGIMMLMKSM
AQELGGLKIR INSIGPGAIK TDINNEAWET PEAAEKLLKL IPYNRIGETE DIGNVAVWLA
SDESDYVHGT TLFVDGGMTL YPGFASNG