Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1655 |
Symbol | cel |
ID | 4183372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1938050 |
End bp | 1940614 |
Gene Length | 2565 bp |
Protein Length | 854 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638071649 |
Product | endoglucanase |
Protein accession | YP_678265 |
Protein GI | 110638056 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAAA ATATGAAAAA AATAGGTTTA TTTATTTCAA TAGTGTTTAG TTCACTGCTT GCAAATGCGC AAACGGGCAC CGGAGATGAT TTCGATAGAG CCGGAACGGG AACGACGGGC ATGGATGCCG GAGCTGCCTG GGTACAAACC GGAACTGCCG ATGAGCAATA TAAACTTTAT TTATATGGAA ATGAATTGGT TGTACAATGC AAAGACGGTG GATTAAATTA TATCGGATTT GGGTACCAGT TTTCACCAAT AGATATTATG GATGCACCAT TGGTTTCTGT AAAAATTAAA TCTTCCTATG GTTATGTAAT GCGCGTTGAT CTTATTGACG CAAACGGCCG CAGAACAAAC CAGATAGATA CAAAACAAAC GATTAAATCT GATGGTAAAT ACAATGATTA TTTATTTGAT TTTACAGGCC GGTTTTATCA GCAATACGGA ACCAATAACG GTCCGGTAGA TGCTACTCAG ATTGTACGTA TGGAATTTAT TACAGATCCT AAAGGCAATT TAGGCGTTGG TCAGGGTTTT AACAAAAACT TTACCATGGA TAGTGTAATG ATTGGTACAA GAGCAAAATC AACCATTGTT ACAGGAGCAA GAGGTATTAA ATTAAATCAG ATTGGTTTCT TTAAAGAAGG CCAGAAAAAA GCAGTTATCA ATGGAGCATC CGCTGCAACA TTTACAATAG TAAACGAAGC AAACACCGTT GTATATTCCG GAAATCTTTC AGCAACAGCA ACATGGACGT ATTCAGGAGA ATCTGTACGT ATAGCGGACT TCAGTAATTT TAAGACACCT GGAAAATATC GATTAATGGC ACCGGGAATA CCAAATGCAT CCTATCCATT TGTTATTTCT AATACCCCGT TAAGCGCAAT TTCTAAAGCC AGTGTTAAAG GATTTTATTA TCAGCGTGCA TCAACGGCAT TGCCTGCAAC ATATGCGGGT ATTTGGTCAA GAGCTGCCGG GCATCCGGAT AATCAAGTAG AAATTCACAA CTCGGCTGTT TCACCAGGAA GAGCTGCGGG ATCTAAAATT TCTTCTCCAC GAGGTTGGTA CGATGCAGGT GACTACAATA AATACATTGT AAATTCAGGT ATTTCAACAT ACACGCTATT GGCTGCATAT GAGCATTTTT CAACCTACTA TGATACACTT AATTTAAATA TTCCCGAAAG TGCAAACTCC GTACCGGACG TTCTGGATGA GGCATTGTAT AACATTCGCT GGATGTTAAC CATGCAGGAT CCATATGATG GCGGCGTGTA TCATAAATTA ACAAATGCTA ATTTTGATGG GGACATTATG CCAAGTGCTG CTACTCAAAA AAGATATGTT GTACAGAAAA GCACTGGAGC AACATTAGAT TTTGCAGCAG TTATGGCGCA GTCTGCCCGC ATTTATTCTA AATTTCCAAC ACAATTACCC GGGCTGGCAG ATTCTTGCAT AAAAGCTGCT AAAAAAGCAT ATGATTGGGC AATTCTAAAC CCAAATATTT TCTACGTACA GGAAAACTTA ACGAGTCCTG CTATTACAAC AGGTACGTAT GATGACTGGA GTTTTGCGGA TGAACAAAGC TGGGCGGCAG CAGAATTATT TACTACAACA TTATCCTCTG AATATTACAA CGATATTAAT TTATCTTCCG GCGCAAGCAT ACCAGGCTGG CAGAATGTAT ACACGCTGGG TTTAATTTCC ATGGCGCATA ATCGTGTTGT ATTAGGAGAC AATTCAGATT CAACATTTAT TAAAAATAAA ATTGTAACCT TAGCAAATGT TTATAGAGAT CATTTTGCTA CAGGATCTGC ATATGGTATA GCAATGGGCG CTAACGGAGG TTTTGGATGG GGAAGTAATT CTCAGGCAGC TAACCAATCT ATGATTTTAA TTCAGGCATT TAACTACACA AAAGACAGTT CTTATTTAAA AGCAGCGGTG TCAAATGTAG ATTACATCTT AGGTAGAAAT GGTGTGAATT ATTGTTTTGT AACAGGTTCA GGAAGCCTTG GCGCAAACAG ACCACATCAT AGAGTGTCAC AGGCAGATGG TATTGCACCA GCTGTACCGG GCTTATTGGT AGGCGGGCCG AATTCAGGTC AGCAGGATAA TTGCCCTGGG TATCCATCTT CACAACCTGC CTTATCTTAT GTAGACAGTG AATGTAGTTA TTCAACAAAT GAAATTGCTA TTAACTGGAA TGCACCGCTT GCTTATATTA CTGGTGCGAT ACAAAGTATC TATGCAGGTA TTGAACCCAG CAAACGTGAT TACACCGTTG ATACACCTAC ATCAACCAGA GATGCTATAT TAAAAAATAC ATTCATTAAT ATTTATCCTA ATCCGGCAGC ATCAAGCATA ACGGTTGTAA AACCGTTTGA GATAACTGCC AAACCTATTA TTCTTGATCT TAACGGCAGA GAATATCCTG TAACCGGAGA CTGGTCAACA ACTGACATTC AACTTAATTT ATCTGATTTG AAAGCAGGTA TGTATCTTAT CCGTTTACAA GGAGAGAATG GTGCAGCCGT TCAGAAATTC ACTGTAATTA AGTAA
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Protein sequence | MTKNMKKIGL FISIVFSSLL ANAQTGTGDD FDRAGTGTTG MDAGAAWVQT GTADEQYKLY LYGNELVVQC KDGGLNYIGF GYQFSPIDIM DAPLVSVKIK SSYGYVMRVD LIDANGRRTN QIDTKQTIKS DGKYNDYLFD FTGRFYQQYG TNNGPVDATQ IVRMEFITDP KGNLGVGQGF NKNFTMDSVM IGTRAKSTIV TGARGIKLNQ IGFFKEGQKK AVINGASAAT FTIVNEANTV VYSGNLSATA TWTYSGESVR IADFSNFKTP GKYRLMAPGI PNASYPFVIS NTPLSAISKA SVKGFYYQRA STALPATYAG IWSRAAGHPD NQVEIHNSAV SPGRAAGSKI SSPRGWYDAG DYNKYIVNSG ISTYTLLAAY EHFSTYYDTL NLNIPESANS VPDVLDEALY NIRWMLTMQD PYDGGVYHKL TNANFDGDIM PSAATQKRYV VQKSTGATLD FAAVMAQSAR IYSKFPTQLP GLADSCIKAA KKAYDWAILN PNIFYVQENL TSPAITTGTY DDWSFADEQS WAAAELFTTT LSSEYYNDIN LSSGASIPGW QNVYTLGLIS MAHNRVVLGD NSDSTFIKNK IVTLANVYRD HFATGSAYGI AMGANGGFGW GSNSQAANQS MILIQAFNYT KDSSYLKAAV SNVDYILGRN GVNYCFVTGS GSLGANRPHH RVSQADGIAP AVPGLLVGGP NSGQQDNCPG YPSSQPALSY VDSECSYSTN EIAINWNAPL AYITGAIQSI YAGIEPSKRD YTVDTPTSTR DAILKNTFIN IYPNPAASSI TVVKPFEITA KPIILDLNGR EYPVTGDWST TDIQLNLSDL KAGMYLIRLQ GENGAAVQKF TVIK
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