| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1654 |
|---|
| Symbol | |
|---|
| ID | 4183371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 1935981 |
|---|
| End bp | 1937771 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638071648 |
|---|
| Product | chromosome segregation ATPase; intracellular signalling protein |
|---|
| Protein accession | YP_678264 |
|---|
| Protein GI | 110638055 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.353113 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCTACCG ATGTATATTC ATTTATTGAT ACAACAAATA ACCTCTCTTT TCAAGACATT
ATTAGTGGAA AATACGATTC TGCTTTTAAA AAAACTGCTA AAGATGCTTT TTATACCAGT
AAATTAAATG TGAATTACTG GCTGATGTTC AGGCTAAAAA ATGTCAATGC TACTAAAAAC
TGGCTCGTAG AATTTCCGGA TCCACATATT TCCAAAATAA TTTTTTACAG AAAACTACCA
GATGGTTCTT TTGAGAAAAC ATTAGCTTCC GGGTTTGATT ACCCATTTTC AAATAAAGAG
TTTAATCATA AAAACTTTGT ATTTAATGTA CGTACTCCCA AAGATTCCAT TGAAACTTTT
TATGCCGTCA TTAATTCCAA CAATACATCC AGTCTATCGG TTTTTGTTCG GGAAACTACA
TTTTTTAGCG GCTATGCATT AAGGGAGTAT GTTCTATTAG GATTTTTCTA TGGTGTTTTG
CTTATAATGG CCATCTATAA TCTATTCCTA TACTTTAACA CAAAGGATTT GGTATATCTG
TTTTATGTAT TTTATACGCT TTGCTGTGCC CTAAACTCCT TTTCAGAGGA TGGACTTGGG
TTTCAATATA TCTGGCCGAA TTTGCCGGTT ATTAACAGCT GGGTTATGTT AGGTACACCT
CCCCTTTTGG TTACGGCTTT TATGATCTAT TCCTATTCTT TCCTGAAGAT TACTCAGTTT
TCTTCCAAAT TCAGTTACCT GATTATTATT TTTTATTTTC TGTATATAAT TTTCTACGTA
GTTGAAAAAT TTGTTTCCGG TACTCGTGTA TTCTATCCAT TTGTCTACCT GATTCCTTTT
ATTTTAATTT ACCTTGTATC TTTTCAGATC TATTTAAAAG GAGAAAAATA CGCACGCTTT
TTCATCCTTG CATACACAAT GATCATTATT AGTTTTGTGA TTTTTGTTTT ACGTATGTTT
GATCTGGTGC CTGTAACCTT GTTTACTGTA TACAGTTTCA ACTTTGGATT TTTAATTGAA
GTAGTAATTT TATCCATTGC ATTGGGAGAC AGAATTCGTA TTGAAAGGCA TCACCGGGAA
TTATTACAGT ATCAGGCAAT AAATCAGTTA AAAGAAAATG AATCGTTAAA AAATACCCTG
ATCTCTGAGT TAAAAGAGAA AGAGGTTATT CTGGACCGTG TAAATAAAGA ACTGGAAACA
AAAGTCGCCA TTCGCACACA GGACCTGCAG AAAAAAACAG ATGAGTTAAG TATTTTCAAT
TCCAATTTAT CCAAGCTGGT TGAAGACTTG AATCAAATGA ATATTAAGCT GGATGTTGAC
AACTGGCAGT TAAAACAAAA AGTTCAGGAA GAAGTAAAAG CCAGGTTGTC TGATGAGGAA
TTAAGCACCG ATAAATTCAA AGAACTTTTT CCCGATGAAG CTGCTTGCCT GCGCTACTTG
GAAAACATAA AGTGGGAAAA TGGTTTTGTC TGTAAGAGAT GCGGACATGA CAGGTATATC
AGTCATACCT CTCCTTTTAC CCGTAAATGT ACCTCCTGCA AGCACGTTGA AAGTGTTACT
GCGGATACAT TGTTTCATGG TATTCGTATT CCAATGGATA AGGCATTTTA TATTGTTTAC
GACACCATCC GTTCAGGTAA ATCAAAAACC TTAGAAGAAT TATCCGATCT GTTGGGTTTA
AATAAAAATA CGATCTGGGC CTTCAGAAAA AAGATTCAGG CAGCGTATGA TTATTTAAAA
ACAAAATCAA AAGGCGGCGT TGTGAAATGG GATGAATTGT TAAGCAATTA A
|
|---|
| Protein sequence | MSTDVYSFID TTNNLSFQDI ISGKYDSAFK KTAKDAFYTS KLNVNYWLMF RLKNVNATKN
WLVEFPDPHI SKIIFYRKLP DGSFEKTLAS GFDYPFSNKE FNHKNFVFNV RTPKDSIETF
YAVINSNNTS SLSVFVRETT FFSGYALREY VLLGFFYGVL LIMAIYNLFL YFNTKDLVYL
FYVFYTLCCA LNSFSEDGLG FQYIWPNLPV INSWVMLGTP PLLVTAFMIY SYSFLKITQF
SSKFSYLIII FYFLYIIFYV VEKFVSGTRV FYPFVYLIPF ILIYLVSFQI YLKGEKYARF
FILAYTMIII SFVIFVLRMF DLVPVTLFTV YSFNFGFLIE VVILSIALGD RIRIERHHRE
LLQYQAINQL KENESLKNTL ISELKEKEVI LDRVNKELET KVAIRTQDLQ KKTDELSIFN
SNLSKLVEDL NQMNIKLDVD NWQLKQKVQE EVKARLSDEE LSTDKFKELF PDEAACLRYL
ENIKWENGFV CKRCGHDRYI SHTSPFTRKC TSCKHVESVT ADTLFHGIRI PMDKAFYIVY
DTIRSGKSKT LEELSDLLGL NKNTIWAFRK KIQAAYDYLK TKSKGGVVKW DELLSN
|
|---|
| |