Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1653 |
Symbol | |
ID | 4183370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1935205 |
End bp | 1935975 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638071647 |
Product | hypothetical protein |
Protein accession | YP_678263 |
Protein GI | 110638054 |
COG category | [S] Function unknown |
COG ID | [COG1496] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00346479 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.628895 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACAAC TACTCATTGA TCAGCAGCAG CATTGGCAAT TCACTGTATT TAACGCATGG CCTTCAGTTA AACACATTGT TACCGGTAGA AATCCGCACA TTCATCGCGG TAATATTGCT GGCTTAAATT ATGGACTGAA TGTTCCGGAT GATCCGTTGG CTGTTGCTCA AAACAGAACT GAAATTGCGC AACTGCTACA TGCGTCAGAT GCCGCTGTTG TAATACCTTT TCAAACACAC AGTAATAATA TAGCTGTAAT AGATGATTCA AATAAAGATC ATATATTTGA AAACACCGAT GCATTAATTA CAAATGTACC TGGTATTATT ATCGGTACCT TATCTGCAGA TTGTGTTCCT ATACTTTTAG CTGATCCGGT TGCGCATGTA ATAGCCAGCA TTCATGCAGG ATGGAAAGGT ACCGTTTCGG AGATCGCTAA ACATACCGTT CAACGTATGC AGAAAGATTT TAATTGCTTG CCTGAAAATA TCCTGGCTGG TATAGGGCCT TCCATTTCAG CGGCATGTTA TGAAGTTGGT GAAGAAGTTG CGATGCATTT TTCAGATTCC TGTAAATCAG ATAGCAGTAA CGGGAAAACA TGTATTGATC TATGGAAAGC AAATCAGGCG CAATTAATTG AGGCCGGGCT GTTACCCGAA CATATTGAAA TTGCCGGCCG CTGTACATTC AGTAATCCGG CTAATTTTTA TTCTGCAAGA AGAGATGGTA TACAGACAGG AAGGATGGGG TCGTTTATTT TATTTAATTA A
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Protein sequence | MQQLLIDQQQ HWQFTVFNAW PSVKHIVTGR NPHIHRGNIA GLNYGLNVPD DPLAVAQNRT EIAQLLHASD AAVVIPFQTH SNNIAVIDDS NKDHIFENTD ALITNVPGII IGTLSADCVP ILLADPVAHV IASIHAGWKG TVSEIAKHTV QRMQKDFNCL PENILAGIGP SISAACYEVG EEVAMHFSDS CKSDSSNGKT CIDLWKANQA QLIEAGLLPE HIEIAGRCTF SNPANFYSAR RDGIQTGRMG SFILFN
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