Gene CHU_1653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1653 
Symbol 
ID4183370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1935205 
End bp1935975 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content40% 
IMG OID638071647 
Producthypothetical protein 
Protein accessionYP_678263 
Protein GI110638054 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00346479 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.628895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAAC TACTCATTGA TCAGCAGCAG CATTGGCAAT TCACTGTATT TAACGCATGG 
CCTTCAGTTA AACACATTGT TACCGGTAGA AATCCGCACA TTCATCGCGG TAATATTGCT
GGCTTAAATT ATGGACTGAA TGTTCCGGAT GATCCGTTGG CTGTTGCTCA AAACAGAACT
GAAATTGCGC AACTGCTACA TGCGTCAGAT GCCGCTGTTG TAATACCTTT TCAAACACAC
AGTAATAATA TAGCTGTAAT AGATGATTCA AATAAAGATC ATATATTTGA AAACACCGAT
GCATTAATTA CAAATGTACC TGGTATTATT ATCGGTACCT TATCTGCAGA TTGTGTTCCT
ATACTTTTAG CTGATCCGGT TGCGCATGTA ATAGCCAGCA TTCATGCAGG ATGGAAAGGT
ACCGTTTCGG AGATCGCTAA ACATACCGTT CAACGTATGC AGAAAGATTT TAATTGCTTG
CCTGAAAATA TCCTGGCTGG TATAGGGCCT TCCATTTCAG CGGCATGTTA TGAAGTTGGT
GAAGAAGTTG CGATGCATTT TTCAGATTCC TGTAAATCAG ATAGCAGTAA CGGGAAAACA
TGTATTGATC TATGGAAAGC AAATCAGGCG CAATTAATTG AGGCCGGGCT GTTACCCGAA
CATATTGAAA TTGCCGGCCG CTGTACATTC AGTAATCCGG CTAATTTTTA TTCTGCAAGA
AGAGATGGTA TACAGACAGG AAGGATGGGG TCGTTTATTT TATTTAATTA A
 
Protein sequence
MQQLLIDQQQ HWQFTVFNAW PSVKHIVTGR NPHIHRGNIA GLNYGLNVPD DPLAVAQNRT 
EIAQLLHASD AAVVIPFQTH SNNIAVIDDS NKDHIFENTD ALITNVPGII IGTLSADCVP
ILLADPVAHV IASIHAGWKG TVSEIAKHTV QRMQKDFNCL PENILAGIGP SISAACYEVG
EEVAMHFSDS CKSDSSNGKT CIDLWKANQA QLIEAGLLPE HIEIAGRCTF SNPANFYSAR
RDGIQTGRMG SFILFN