Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1650 |
Symbol | |
ID | 4183368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1933420 |
End bp | 1934253 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638071645 |
Product | hypothetical protein |
Protein accession | YP_678261 |
Protein GI | 110638052 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00134498 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.369748 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGAAAAA TTGTATCTGC CTTTTTATTA TTTTCAGGTA TATCATTTTT ACATGCCCAA ACACCTTTTG AGGGCACAAT AAAATGGACA CTTTCTATTA ATATGCCTGG CACAAAAAAC GGTAGTGTTG AATTAACAGC GAAGCAGCAG GCAGAACTTA AAGATGGGAT TGCTCAATTG GAAAAACAAT TGAATGATCC GAATATGAAA GCCGCTTTTG AAAGCAATCC TTCTCTGAAA GCCACGCTTG AAACACAATT ACAGGCAATG AAATCCATGC AGGGCGCAAG CGGTGCAAAC AGCCTGATGC CAAAAGGATG TTCCATTAAA ACAAAAAATG GAAATTCATT AACAACCATT GATGGCGGAA TGGCAAATAC AGCGGGAGAT ATCTTATATA TAAAATCTGT TGATAAAACA TATAGTATTA AACATGCAGA AAAAACGTAT AGCGTAATAC CTGCTTCAAC AAAAACAGCT ACCGAGCAAT CTGCGGTCAC TGTTACACCT ACAACAGAAA CAAAAAAAAT ACTCTCTTAT ACCTGCACAA AATACAATGT AACACTGATA CACAATAATG TTACACATAT CATGCAGATA TGGGCAACAA AAGAGTTAAA GCAATATGAT TCTAAATCAT TTCATAGCGG TGGTCTGGGG CAGGATCAAA CAGCTGAAGC ATTAAAAAAG ATTGATGGTG TACCGTTACG CATTGAAGCA TCTGAAAAGG GTGGTGAAAT TATAATGGAA GTAGTACAAA TTTCTCCTGA AAAACTTTCA GATTATTTAT TCATACTTCC TTCCGGTTAT AAAGAAGTTC CTTACACAAA GTAA
|
Protein sequence | MRKIVSAFLL FSGISFLHAQ TPFEGTIKWT LSINMPGTKN GSVELTAKQQ AELKDGIAQL EKQLNDPNMK AAFESNPSLK ATLETQLQAM KSMQGASGAN SLMPKGCSIK TKNGNSLTTI DGGMANTAGD ILYIKSVDKT YSIKHAEKTY SVIPASTKTA TEQSAVTVTP TTETKKILSY TCTKYNVTLI HNNVTHIMQI WATKELKQYD SKSFHSGGLG QDQTAEALKK IDGVPLRIEA SEKGGEIIME VVQISPEKLS DYLFILPSGY KEVPYTK
|
| |