Gene CHU_1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1650 
Symbol 
ID4183368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1933420 
End bp1934253 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content36% 
IMG OID638071645 
Producthypothetical protein 
Protein accessionYP_678261 
Protein GI110638052 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00134498 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.369748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAA TTGTATCTGC CTTTTTATTA TTTTCAGGTA TATCATTTTT ACATGCCCAA 
ACACCTTTTG AGGGCACAAT AAAATGGACA CTTTCTATTA ATATGCCTGG CACAAAAAAC
GGTAGTGTTG AATTAACAGC GAAGCAGCAG GCAGAACTTA AAGATGGGAT TGCTCAATTG
GAAAAACAAT TGAATGATCC GAATATGAAA GCCGCTTTTG AAAGCAATCC TTCTCTGAAA
GCCACGCTTG AAACACAATT ACAGGCAATG AAATCCATGC AGGGCGCAAG CGGTGCAAAC
AGCCTGATGC CAAAAGGATG TTCCATTAAA ACAAAAAATG GAAATTCATT AACAACCATT
GATGGCGGAA TGGCAAATAC AGCGGGAGAT ATCTTATATA TAAAATCTGT TGATAAAACA
TATAGTATTA AACATGCAGA AAAAACGTAT AGCGTAATAC CTGCTTCAAC AAAAACAGCT
ACCGAGCAAT CTGCGGTCAC TGTTACACCT ACAACAGAAA CAAAAAAAAT ACTCTCTTAT
ACCTGCACAA AATACAATGT AACACTGATA CACAATAATG TTACACATAT CATGCAGATA
TGGGCAACAA AAGAGTTAAA GCAATATGAT TCTAAATCAT TTCATAGCGG TGGTCTGGGG
CAGGATCAAA CAGCTGAAGC ATTAAAAAAG ATTGATGGTG TACCGTTACG CATTGAAGCA
TCTGAAAAGG GTGGTGAAAT TATAATGGAA GTAGTACAAA TTTCTCCTGA AAAACTTTCA
GATTATTTAT TCATACTTCC TTCCGGTTAT AAAGAAGTTC CTTACACAAA GTAA
 
Protein sequence
MRKIVSAFLL FSGISFLHAQ TPFEGTIKWT LSINMPGTKN GSVELTAKQQ AELKDGIAQL 
EKQLNDPNMK AAFESNPSLK ATLETQLQAM KSMQGASGAN SLMPKGCSIK TKNGNSLTTI
DGGMANTAGD ILYIKSVDKT YSIKHAEKTY SVIPASTKTA TEQSAVTVTP TTETKKILSY
TCTKYNVTLI HNNVTHIMQI WATKELKQYD SKSFHSGGLG QDQTAEALKK IDGVPLRIEA
SEKGGEIIME VVQISPEKLS DYLFILPSGY KEVPYTK