| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1647 |
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| Symbol | |
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| ID | 4183365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1929732 |
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| End bp | 1931651 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638071641 |
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| Product | hypothetical protein |
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| Protein accession | YP_678258 |
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| Protein GI | 110638049 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.201062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0771148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTCTTC AGCAATATCC GGCATGGATT TTTTTTGTAG AATTAGAATC TCCTGTTTCC
GATTTAACGG TACTGCAACT TGAAATAGAT TATATTCAAC TGGGCAGTTA TGTTGATTGG
GCTTTCAATA CAATAACAGG AAATATTTTT AATGACAATA ATGGTGACTG TCAATTTAAT
TCCACAGACA ATCCGGTAAA GCATAGTTTG GTAAAAGCCT TGCCTGGCCC ATACTACGCT
TATACAGATG AAAATGGTTT TTATGAATTA AAGGTAGATA CATTAAATAC TTCATATACG
GTATCGTACA CTACAGATTC AGAAGCAACG CTTATTGAAA AAATATGTCC TGCATCTGGT
ATGTACTCCG TATCAACACC TAAAGGAAAA TCAACCTATT GCTGCCATGA TTTCGCTCAG
AAAATAAAAC AATGTGCGGT ATTAAAGATA GATATTAACA GCGATAGAAG AAGACGGTGT
TTTAAAGGTT TTACGTATGT GAATTACCAG AATGTTGGTA ATATTAATTC GTCACAGGCA
CAAATAAAAG TGGTATACCC TGAATTTGTA AAACCAATAA GCAGCACACC AGCCTGGACA
AGCAAAGTTG GTGACACGTT GTATTATACT GTAGGGCTTG TTGCTCCATA TTCACAACAG
ACAATAACAA TTATTGATTC GGTTATTTGT GGAATTGAAA GTATCCGGTC ATTAACTCAA
TGTACACAGG CTATGATCTC CCCTGCCAAT GCATGCTTAT ACGAAGACAT AGACTGGAAT
AATTCAGATG TTATTGTGAG AGGTAAGTGT GATATGGGTA TTGCTAAATT TACCATTCTT
AACGGAGGAT CGGGAGATAT GCCTGATAGT ACAGCATTCA GGGTATATAC AAATGACACC
TTAATTTCTA CACAAAAATT TGCCTTAAGG TCACAGGAAT ATTTTCAGGT TCAATTACCA
GCTTATGGAA AAGTTATTCG CTTAGAAGCT GATCAGTCTG CAAACCACCC GGCATTTAAC
ACCATTCCGA GAGTTTCGTT AGAAGGCTGT GTAACGAATC AGGCATTATT ACAGAGCGCG
TATAAAGGTA TTGCAATGAA TACCCCGTTA AATAATGATT TTGTGTCGTC AACATCGTGT
ATGCAAATTA CGGATAGCTA TGATCCAAAT GATAAGGCCG TATTCCCTGT GGGGCAATCA
GAAAGGAATT ATATAAGTGC AGGAACAAAA CTGAATTATA CTATTCGTTT TGAAAATACA
GGAAGTGATG ACGCCTATAC GGTGGTTGTA GTTGATACAC TAGATTCAGA TTTAGACGCT
TCAACTTTTT TAGCAGGAAG TTCAAGCCAC TCCTACTCGA TTAAAAGAGA AGTGATTGAT
GACAGAGAGA TTGTTACGTT TCAGTTTACT GATATTAATT TATCACCTAA AAAAGTTGAT
AGCATCAAAT CTCAAGGCTT TATTAAATTT TCAATTTCTA CCAGGCCGGA TGTAGCGAAT
GGAATGCTGA TTGAAAATGA GGCAAACATA TTTTTTGATT ACAATTCAGC CATTGTTACC
AATAAGGTTT CACAAACCAT TGGTGAGTAT ATAGAAGAAA AGCCGGAACT GGGAAGTATT
GTTTCAAAAA CTCCTGTAAA TAATATTACT ACCGGACTTA CATCTAAAAC AAATACAAAG
GATCTTATTC TTCTCTACCC AAATCCAGTA AGCGAAAGCA TTACAATCAA ATTCCCGAGA
GAGACAATAG AATCTACTAT AAATGTTTAT ACAATAGATG GTGCAACTGT ATTAACACAG
CGTTTAGGTG CTGTTAAAGA AAGCAGGATC ATATTACAAC AATTGCCGCA AGGTATCTAT
TATTACAGCA TAGCAGATTC AAGTGGTTTG AACCAGCACG GTAAAATAAT AAAACAATAG
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| Protein sequence | MILQQYPAWI FFVELESPVS DLTVLQLEID YIQLGSYVDW AFNTITGNIF NDNNGDCQFN
STDNPVKHSL VKALPGPYYA YTDENGFYEL KVDTLNTSYT VSYTTDSEAT LIEKICPASG
MYSVSTPKGK STYCCHDFAQ KIKQCAVLKI DINSDRRRRC FKGFTYVNYQ NVGNINSSQA
QIKVVYPEFV KPISSTPAWT SKVGDTLYYT VGLVAPYSQQ TITIIDSVIC GIESIRSLTQ
CTQAMISPAN ACLYEDIDWN NSDVIVRGKC DMGIAKFTIL NGGSGDMPDS TAFRVYTNDT
LISTQKFALR SQEYFQVQLP AYGKVIRLEA DQSANHPAFN TIPRVSLEGC VTNQALLQSA
YKGIAMNTPL NNDFVSSTSC MQITDSYDPN DKAVFPVGQS ERNYISAGTK LNYTIRFENT
GSDDAYTVVV VDTLDSDLDA STFLAGSSSH SYSIKREVID DREIVTFQFT DINLSPKKVD
SIKSQGFIKF SISTRPDVAN GMLIENEANI FFDYNSAIVT NKVSQTIGEY IEEKPELGSI
VSKTPVNNIT TGLTSKTNTK DLILLYPNPV SESITIKFPR ETIESTINVY TIDGATVLTQ
RLGAVKESRI ILQQLPQGIY YYSIADSSGL NQHGKIIKQ
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