Gene CHU_1632 details

Gene Information

• Locus tag: CHU_1632
• Symbol: ycfF
• ID: 4187009
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cytophaga hutchinsonii ATCC 33406
• Kingdom: Bacteria
• Replicon accession: NC_008255
• Strand: +
• Start bp: 1909187
• End bp: 1909579
• Gene Length: 393 bp
• Protein Length: 130 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 638071625
• Product: HIT family protein
• Protein accession: YP_678242
• Protein GI: 110638034
• COG category: [F] Nucleotide transport and metabolism; [G] Carbohydrate transport and metabolism; [R] General function prediction only
• COG ID: [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.0437202
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 4
• Fosmid unclonability p-value: 0.00568101
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGCCGAGTA TTTTTACTAA AATAATCAAT AAAGAAATAC CTGCTTTTAT TATAGCAGAA 
ACAGAAACAC TTATTGCATT TCTGGATGTA TTTCCATTAG CGAAAGGACA CGTGCTTGTT 
GTACCTAAAA AAGAGATTGA TTATATTTTT TCAGTAGAAG ATACTCTTCT GGCGGAAATG 
ACATTGTTCT CGAAGAAAAT TGCCTTAGCA ATAGAAAAAG CTATTCCATG TAAACGTGTA 
GGTGTTGCAG TTATCGGGCT GGAAGTTCCG CATGCGCATA TTCACTTAAT ACCTTTACAA 
ACTGTACAGG ATATTAATTT CACCAGAGAA AAATTAAAAC TGCCTGCAGA AGAAATGAAT 
GAAATTGCAG AAGCCATTAA AAAGCAGTTG TAA 

 

Protein sequence

MPSIFTKIIN KEIPAFIIAE TETLIAFLDV FPLAKGHVLV VPKKEIDYIF SVEDTLLAEM 
TLFSKKIALA IEKAIPCKRV GVAVIGLEVP HAHIHLIPLQ TVQDINFTRE KLKLPAEEMN 
EIAEAIKKQL