Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1631 |
Symbol | greA |
ID | 4187008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1908702 |
End bp | 1909178 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638071624 |
Product | transcription elongation factor GreA |
Protein accession | YP_678241 |
Protein GI | 110638033 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0576288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00568101 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTAGTA AAGTATCATA TTACACAGAA GAAGGTTTAA ACAAGTTGAA AAACGAGTTA AGTCATCTTA AAACAAAAGG CCGTTCTCAA ATCGCTGCGC AGATTGCTGA AGCTCGCGAT AAAGGTGACC TAAGTGAAAA TGCGGAATAC GATGCAGCAA AAGATGCTCA GGGTTTATTG GAACTTAAAA TTTCTAAATT GGAAGAAATT GTTTCTAATG CCCGTTTATT AGATGAAAGC ACTATTGATA CATCTAAAGC TTCTATTCTT ACAAAAGTAA AAATCAAGAA TAAGAAAACC GGACATATTG TTGAGTATAC ATTGGTTTCT GAAGAAGAAG CGGACTTAAA AGCTGGCCGT ATTTCGTTGA AATCTCCAAT TGGTAAAGCA TTGCTTGGTA GAGAAGTAGG CGAAACTGTT TTGGTAGATG TACCTGCGGG TAAAATTGAA TTTGAAATTT TAGATATCGG AAGATAA
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Protein sequence | MSSKVSYYTE EGLNKLKNEL SHLKTKGRSQ IAAQIAEARD KGDLSENAEY DAAKDAQGLL ELKISKLEEI VSNARLLDES TIDTSKASIL TKVKIKNKKT GHIVEYTLVS EEEADLKAGR ISLKSPIGKA LLGREVGETV LVDVPAGKIE FEILDIGR
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