| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1627 |
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| Symbol | pdxA |
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| ID | 4187004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1904066 |
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| End bp | 1905091 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638071620 |
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| Product | pyridoxal phosphate biosynthesis protein |
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| Protein accession | YP_678237 |
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| Protein GI | 110638029 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0172619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00782832 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACACCAA ATCCAACATT TGACAGACCT GTTATTGGTA TCACCCTAGG TGATTTCAAT
GGCGTTGGCC CGGAATTAAT CCTTAAAACT TTTTCAGATT CCCGTATACT AAAAGTGTGT
ATACCTGTGA TTTATGCTAA TTATAAATTA CTTGCCCGTT ATAAGAAAAT ATTAGGCTTG
TATGAAGAGC TGAATTTTCA TTCAATCCGC AGTATACAGG AAGTGCAACC TAAAAAAATT
AACCTTCTGG TTTGCTGGGA AGATGACTTT GAAGTTACGC CTGGTCAACC TACCAACGAG
TCTGGTAAAG CGGCTTTCCT TTCATTGGAA AAAGCCGTGA GTGATGCGCT TGCCGGTTCA
ATACAGGCAA TTGTAACCGC TCCTATAGAT AAAAAGAATA TTCAGCAGGA AGGCTTTACA
TTTGCAGGCC ATACAGAATA TCTGGCAGAA CGCTGTGGCG TAAAAGATAA CCTTATGGTA
ATGGTTAGTC CTACTATGAA GGTTGCGTTA GCTACAGCAC ACGTTTCTGT GGCACAAATA
ACCGCCAATT TAACCCGCGA ACGTTTATTG ACTAAAATAA ACCTGTTATA TAATTCCTTG
AAAAAGGATT TTGGTATTTT AAAACCTAAA ATTGCTGTTT TAGGACTAAA TCCTCATGCA
GGAGAGAACG GAATGATGGG TACAGAGGAG CAAACGTTAA TTTCTCCGGT AATTAAAGAA
TTAAAAGATA AAGGAATATT AATATTTGGC CCTTTCCCGG CAGATGGCTT TTTCGGACAG
CATCACTATA CCAAGTTTGA TGGAGTTTTA GCCATGTATC ACGATCAGGG GTTGGCTCCC
TTTAAAGCAT TGTGTTTTGA TGAAGGCGTT AATTTTACTG GTGGTTTGCC ATTTATCCGT
ACTTCACCTG ATCATGGAAC AGCATATGAT CTGGCAGGTA AAAATCTGGT GGCTGAAGAG
TCCTTCAGAT CGGCCATTTA TTTGGCCTGT GACTTGGTAA AAAACAGTTT GTTAGTAAAT
AAGTAA
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| Protein sequence | MTPNPTFDRP VIGITLGDFN GVGPELILKT FSDSRILKVC IPVIYANYKL LARYKKILGL
YEELNFHSIR SIQEVQPKKI NLLVCWEDDF EVTPGQPTNE SGKAAFLSLE KAVSDALAGS
IQAIVTAPID KKNIQQEGFT FAGHTEYLAE RCGVKDNLMV MVSPTMKVAL ATAHVSVAQI
TANLTRERLL TKINLLYNSL KKDFGILKPK IAVLGLNPHA GENGMMGTEE QTLISPVIKE
LKDKGILIFG PFPADGFFGQ HHYTKFDGVL AMYHDQGLAP FKALCFDEGV NFTGGLPFIR
TSPDHGTAYD LAGKNLVAEE SFRSAIYLAC DLVKNSLLVN K
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