Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1626 |
Symbol | |
ID | 4187003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1903402 |
End bp | 1903971 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638071619 |
Product | hypothetical protein |
Protein accession | YP_678236 |
Protein GI | 110638028 |
COG category | [R] General function prediction only |
COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0411275 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00685696 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAAAGA ATAGGTTAAG AGATTTTGAT ATTGAGATAT CACATGTCAA GGAACACACA CCGCACAAGT TTGAGTTCCA GCTTAATGAT TCTTTTTTTA CGTTATTTGA AGATAGTCTG ATCCAGAAGG GATCAGTAAC GGTTGATGTA GAATTTGAGA AAACGCCCCT GCTTATTCGA ATGAATTTCA TATTAAATGG AGTTGTTGAA TTGGTTTGTG ATCGTTCTTT AGATACCTTT GAGCAACCTA TTTCATCTGA AAACGTTCTT TTATTCAAAT ATTCTGAAGA AGAAGGCGAA ATAACAGAAG AGATTATTGG CATTAAAAGA GAAACCATCA AAATTAATAT CGCTCAGTAT ATTTATGAGT TTATTAATTT AGAAGTACCC ATAAAAAAAC TTCATCCCCG TTTTCAGGAA GAAGAAGTCG ATAATGATAC ATCAGAAACA TTATTGATTT ATTCTACAGA AACGGAAAAT GAAGAAAAGA GTGAATCACC TACTGAAGAT TTAATTGATC CGAGGTGGCT GGCACTAAAG AGTTTAAAAG ATAAAAGTAA GTTAAACTAG
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Protein sequence | MQKNRLRDFD IEISHVKEHT PHKFEFQLND SFFTLFEDSL IQKGSVTVDV EFEKTPLLIR MNFILNGVVE LVCDRSLDTF EQPISSENVL LFKYSEEEGE ITEEIIGIKR ETIKINIAQY IYEFINLEVP IKKLHPRFQE EEVDNDTSET LLIYSTETEN EEKSESPTED LIDPRWLALK SLKDKSKLN
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