Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1623 |
Symbol | accB |
ID | 4187000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1900669 |
End bp | 1901163 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638071615 |
Product | biotin carboxyl carrier protein of acetyl-CoA carboxylase |
Protein accession | YP_678232 |
Protein GI | 110638025 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0511] Biotin carboxyl carrier protein |
TIGRFAM ID | [TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0442919 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCAA AGGAAATTCA GGAATTGATT GACTTTATTG CTAGCTCAGG TTTAGCGGAA GTAAATATTG AAACAGAACA ATTTAAAATA AACGTTAAAA AATATCCGAA CTCTGCTGTT AAAGCTTCGG ATATCATAAT GCCTGCATTA CCTCAGGTAG CACCAATCCA ACAATTACCT GCTACTCAAG CACCAGTTGC CACTCCTGCT GCTGCTGAGA CAAAAGTCTC TGCTCCTGCT GCTGAATCAT CAAATCTGAT TACAATTAAA TCACCGATGA TCGGAACATT CTACCGTTCT TCTAGTCCTG AAACTCCTTC TTTTGTAAAT GTTGGGGATG TCATCGAAGC TGGCAAGCCA GTTTGTATCA TTGAAGCAAT GAAATTATTT AATGAAATTG AATCTGAAAT TTCAGGTAAA ATTGTTAAAA TATTAGTTGA AAACGCTACT CCAGTTGAAT ACGATCAACC ATTATTCTTA GTTGAACCTA AGTAA
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Protein sequence | MKPKEIQELI DFIASSGLAE VNIETEQFKI NVKKYPNSAV KASDIIMPAL PQVAPIQQLP ATQAPVATPA AAETKVSAPA AESSNLITIK SPMIGTFYRS SSPETPSFVN VGDVIEAGKP VCIIEAMKLF NEIESEISGK IVKILVENAT PVEYDQPLFL VEPK
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