Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1622 |
Symbol | accC |
ID | 4187097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1899287 |
End bp | 1900633 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638071614 |
Product | biotin carboxylase, subunit of acetyl CoA carboxylase |
Protein accession | YP_678231 |
Protein GI | 110638024 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0439] Biotin carboxylase |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0149064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0202199 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAAGA AAATATTAAT TGCTAACAGG GGAGAAATTG CATTACGTGT AATCCGTGCT TGTAAAGAGC TTGGAATAAA AACGGTTGCT GTATACTCTG TTGCAGATAA AGAAAGTTTA CATGTACGTT TTGCTGATGA AGCGGTTTGT ATAGGACCTG CTCCTTCGAA TCAATCGTAC CTGAGCATAC CAAATATTAT TGCAGCTGCT GAAATTACAA ATGCAGATGC TATTCACCCT GGTTATGGGT TCTTGTCTGA AAATGCAAAA TTCTCTCAGG TGTGTGAAGA CTATGGAATT AAATTTATTG GTGCAAGTGC AGCAATGATT AATTCTATGG GCGATAAAGC TTCTGCAAAA GATACCATGA AAAAAGCCGG TGTGCCATGT ATTCCCGGTT CGGATGGTTT GTTGGGTTCA ATCGAAGAAG GTATCAAATT AGCGAATAAA GTAAAGTACC CTGTGATCCT GAAAGCTACG GCTGGCGGTG GTGGCAGAGG TATGCGTATT ATCCGCAGCG ACCGTGAATT TGAAAAAGCA TGGGTTGATG CGAAACAGGA AGCTGGCGCT TCTTTTGGTA ACGATGGTTT GTATTTAGAA AAATTCATCG AAGAACCACG CCATATAGAA GTTCAGTTAT TAGGCGATAA ATTCGGAACG GTTGTTCACT TATCTGAAAG AGATTGTTCT ATTCAGAGAC GTCACCAGAA ACTGATTGAA GAAACTCCTT CTCCGATCAT TACAGAACGC TTGCGTACTA AAATGGGTGA AGCTGCTGTA AAAGGTGCAA AATCTATTAA GTATGAAGGT GCCGGTACCA TTGAATTCCT GGTAGACAAA CACGGTGATT TCTATTTCAT GGAAATGAAT ACCCGTATTC AGGTTGAACA TACCATTACC GAAGAAGTAA CTGGTGTGGA TCTTGTTAAA ATGCAGATCC GAGTGGCAGC AGGCGAAAAG CTTGAAAAGA AAAACTACTT ACCGTTACGT CATTCTATTG AATGCAGAAT AAATGCGGAA GACGCTGCAA ACGGTTTCCG TCCTTCTCCG GGCAAGATCA CGAACTTCCA TATGCCGAGC GGTTTTGGTG TACGTGTAGA CAGCCACTGT TATACAGGTT ATACAATACC TCCTAATTAC GATTCTATGA TTGCTAAGCT GATCGTTAAC GCGGCTACGC GTGATGAAGC GTGTGACCGC ATGAAACGTG CCTTACAGGA GTTTGTTATT GAAGGTGTAA AAACAACTAT TCCATTCCAT ATTACGATGA TGGACGACCC TCAGTTCAGG TCCGGGAAGT TTACGACAGC ATTCCTTGAG ACATTTGATT TCTCAAAAAT TAAATAA
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Protein sequence | MFKKILIANR GEIALRVIRA CKELGIKTVA VYSVADKESL HVRFADEAVC IGPAPSNQSY LSIPNIIAAA EITNADAIHP GYGFLSENAK FSQVCEDYGI KFIGASAAMI NSMGDKASAK DTMKKAGVPC IPGSDGLLGS IEEGIKLANK VKYPVILKAT AGGGGRGMRI IRSDREFEKA WVDAKQEAGA SFGNDGLYLE KFIEEPRHIE VQLLGDKFGT VVHLSERDCS IQRRHQKLIE ETPSPIITER LRTKMGEAAV KGAKSIKYEG AGTIEFLVDK HGDFYFMEMN TRIQVEHTIT EEVTGVDLVK MQIRVAAGEK LEKKNYLPLR HSIECRINAE DAANGFRPSP GKITNFHMPS GFGVRVDSHC YTGYTIPPNY DSMIAKLIVN AATRDEACDR MKRALQEFVI EGVKTTIPFH ITMMDDPQFR SGKFTTAFLE TFDFSKIK
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