Gene CHU_1622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1622 
SymbolaccC 
ID4187097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1899287 
End bp1900633 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content41% 
IMG OID638071614 
Productbiotin carboxylase, subunit of acetyl CoA carboxylase 
Protein accessionYP_678231 
Protein GI110638024 
COG category[I] Lipid transport and metabolism 
COG ID[COG0439] Biotin carboxylase 
TIGRFAM ID[TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0149064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0202199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAGA AAATATTAAT TGCTAACAGG GGAGAAATTG CATTACGTGT AATCCGTGCT 
TGTAAAGAGC TTGGAATAAA AACGGTTGCT GTATACTCTG TTGCAGATAA AGAAAGTTTA
CATGTACGTT TTGCTGATGA AGCGGTTTGT ATAGGACCTG CTCCTTCGAA TCAATCGTAC
CTGAGCATAC CAAATATTAT TGCAGCTGCT GAAATTACAA ATGCAGATGC TATTCACCCT
GGTTATGGGT TCTTGTCTGA AAATGCAAAA TTCTCTCAGG TGTGTGAAGA CTATGGAATT
AAATTTATTG GTGCAAGTGC AGCAATGATT AATTCTATGG GCGATAAAGC TTCTGCAAAA
GATACCATGA AAAAAGCCGG TGTGCCATGT ATTCCCGGTT CGGATGGTTT GTTGGGTTCA
ATCGAAGAAG GTATCAAATT AGCGAATAAA GTAAAGTACC CTGTGATCCT GAAAGCTACG
GCTGGCGGTG GTGGCAGAGG TATGCGTATT ATCCGCAGCG ACCGTGAATT TGAAAAAGCA
TGGGTTGATG CGAAACAGGA AGCTGGCGCT TCTTTTGGTA ACGATGGTTT GTATTTAGAA
AAATTCATCG AAGAACCACG CCATATAGAA GTTCAGTTAT TAGGCGATAA ATTCGGAACG
GTTGTTCACT TATCTGAAAG AGATTGTTCT ATTCAGAGAC GTCACCAGAA ACTGATTGAA
GAAACTCCTT CTCCGATCAT TACAGAACGC TTGCGTACTA AAATGGGTGA AGCTGCTGTA
AAAGGTGCAA AATCTATTAA GTATGAAGGT GCCGGTACCA TTGAATTCCT GGTAGACAAA
CACGGTGATT TCTATTTCAT GGAAATGAAT ACCCGTATTC AGGTTGAACA TACCATTACC
GAAGAAGTAA CTGGTGTGGA TCTTGTTAAA ATGCAGATCC GAGTGGCAGC AGGCGAAAAG
CTTGAAAAGA AAAACTACTT ACCGTTACGT CATTCTATTG AATGCAGAAT AAATGCGGAA
GACGCTGCAA ACGGTTTCCG TCCTTCTCCG GGCAAGATCA CGAACTTCCA TATGCCGAGC
GGTTTTGGTG TACGTGTAGA CAGCCACTGT TATACAGGTT ATACAATACC TCCTAATTAC
GATTCTATGA TTGCTAAGCT GATCGTTAAC GCGGCTACGC GTGATGAAGC GTGTGACCGC
ATGAAACGTG CCTTACAGGA GTTTGTTATT GAAGGTGTAA AAACAACTAT TCCATTCCAT
ATTACGATGA TGGACGACCC TCAGTTCAGG TCCGGGAAGT TTACGACAGC ATTCCTTGAG
ACATTTGATT TCTCAAAAAT TAAATAA
 
Protein sequence
MFKKILIANR GEIALRVIRA CKELGIKTVA VYSVADKESL HVRFADEAVC IGPAPSNQSY 
LSIPNIIAAA EITNADAIHP GYGFLSENAK FSQVCEDYGI KFIGASAAMI NSMGDKASAK
DTMKKAGVPC IPGSDGLLGS IEEGIKLANK VKYPVILKAT AGGGGRGMRI IRSDREFEKA
WVDAKQEAGA SFGNDGLYLE KFIEEPRHIE VQLLGDKFGT VVHLSERDCS IQRRHQKLIE
ETPSPIITER LRTKMGEAAV KGAKSIKYEG AGTIEFLVDK HGDFYFMEMN TRIQVEHTIT
EEVTGVDLVK MQIRVAAGEK LEKKNYLPLR HSIECRINAE DAANGFRPSP GKITNFHMPS
GFGVRVDSHC YTGYTIPPNY DSMIAKLIVN AATRDEACDR MKRALQEFVI EGVKTTIPFH
ITMMDDPQFR SGKFTTAFLE TFDFSKIK