Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1610 |
Symbol | |
ID | 4187086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1888903 |
End bp | 1889583 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638071603 |
Product | hypothetical protein |
Protein accession | YP_678220 |
Protein GI | 110638013 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.108508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.474453 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTTAA TCAGCCGATT TTTAAAAACT ATCGTTTTAA GCAGTTTACT CATTATTTCC GCTTATAAAG CTCAGGCACA ATTTGATGAT GAGCTTCAAG CAAAAAAGAA CTGCTTTAAA TTCACTCCTC AAGGTTTTTT TGTTTCAACA TTTATGTTGT CTTACGAAAG ATACATTGCT TCAGGCATTT CTTTGCAGAT TACCGGTGGA TTATTATCTG CACAGAAAAA CTATGACACA AATTATAATG GTACAGCATA TAAAGACAAA GATAAAGCTT CAGGCGGACT TGTTGAAGGT ATGTTAAAAT ATTACTTTTT GCGTGGACGT TCACATATGA GCGGTTTGTA TGCAGGTCCT TATTATAAAT ACTCTAAAAA TGATTTTGTA ATAAATAGAG ACGGGACAAG TACATATGAT CCTATTACCA GTCAATATAC AAGTATGCCG CCTTCACAAA TGAAGTATTC AATCACAACG GGTGAATTCG GTGCAGTTTT CGGTTATCAG GTAGTTATAA AAAATTCTTT TGTAATGGAT ATGTTTGTTG GCGGTGGTGT TAAAAGTTCT GACAATAACA GTCCGGCAAC ATATACGGAT GAACGTTTCT GGATTCTGGA GTCTCAGGAT TACAGCGGTG TTGTCCCTAA AGCAGGGTTT AGATTAGGTT TTGTATTCTA G
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Protein sequence | MFLISRFLKT IVLSSLLIIS AYKAQAQFDD ELQAKKNCFK FTPQGFFVST FMLSYERYIA SGISLQITGG LLSAQKNYDT NYNGTAYKDK DKASGGLVEG MLKYYFLRGR SHMSGLYAGP YYKYSKNDFV INRDGTSTYD PITSQYTSMP PSQMKYSITT GEFGAVFGYQ VVIKNSFVMD MFVGGGVKSS DNNSPATYTD ERFWILESQD YSGVVPKAGF RLGFVF
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