Gene CHU_1610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1610 
Symbol 
ID4187086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1888903 
End bp1889583 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content35% 
IMG OID638071603 
Producthypothetical protein 
Protein accessionYP_678220 
Protein GI110638013 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.108508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.474453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTTAA TCAGCCGATT TTTAAAAACT ATCGTTTTAA GCAGTTTACT CATTATTTCC 
GCTTATAAAG CTCAGGCACA ATTTGATGAT GAGCTTCAAG CAAAAAAGAA CTGCTTTAAA
TTCACTCCTC AAGGTTTTTT TGTTTCAACA TTTATGTTGT CTTACGAAAG ATACATTGCT
TCAGGCATTT CTTTGCAGAT TACCGGTGGA TTATTATCTG CACAGAAAAA CTATGACACA
AATTATAATG GTACAGCATA TAAAGACAAA GATAAAGCTT CAGGCGGACT TGTTGAAGGT
ATGTTAAAAT ATTACTTTTT GCGTGGACGT TCACATATGA GCGGTTTGTA TGCAGGTCCT
TATTATAAAT ACTCTAAAAA TGATTTTGTA ATAAATAGAG ACGGGACAAG TACATATGAT
CCTATTACCA GTCAATATAC AAGTATGCCG CCTTCACAAA TGAAGTATTC AATCACAACG
GGTGAATTCG GTGCAGTTTT CGGTTATCAG GTAGTTATAA AAAATTCTTT TGTAATGGAT
ATGTTTGTTG GCGGTGGTGT TAAAAGTTCT GACAATAACA GTCCGGCAAC ATATACGGAT
GAACGTTTCT GGATTCTGGA GTCTCAGGAT TACAGCGGTG TTGTCCCTAA AGCAGGGTTT
AGATTAGGTT TTGTATTCTA G
 
Protein sequence
MFLISRFLKT IVLSSLLIIS AYKAQAQFDD ELQAKKNCFK FTPQGFFVST FMLSYERYIA 
SGISLQITGG LLSAQKNYDT NYNGTAYKDK DKASGGLVEG MLKYYFLRGR SHMSGLYAGP
YYKYSKNDFV INRDGTSTYD PITSQYTSMP PSQMKYSITT GEFGAVFGYQ VVIKNSFVMD
MFVGGGVKSS DNNSPATYTD ERFWILESQD YSGVVPKAGF RLGFVF