Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1608 |
Symbol | |
ID | 4187084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1886240 |
End bp | 1887877 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638071601 |
Product | hypothetical protein |
Protein accession | YP_678218 |
Protein GI | 110638011 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.398397 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.502093 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC TGTTTACGAG TTTATTATTG TTAACACAAT CTGTTGTGGG ATTCACACAG ATAACATCAA CATTTGAGAG CTTGCCGCTT GATCAGACAG GATACTGGAT AGGAGCAGAT AAGTCTGGCG GTTTTACAGA TGGCAACGCT TATTTTAAAA ATAATTATTC CACAGAATAT GGAGATGGTT ACTGGGAAGG TGGCTTTGCT TATTCTAATC ACACAGATGT AACAACAGCT GGGTTTACAA ATCAATACAG TGTTTATACA GGCAGTGGTG TTGGCCATTC AGGTAAATTT GCAATCGGAA AAGATCAGGC AATTGTGCAG TTAAAAAATG AAGCAAAAAA ATCTCCGGTA ACAGGTTTTT ATGTAGCTAA TACTACTTAT GCTGTATTAG ATATGAAAAA TGGTACACCA ACTATTTCTA AAAAATTTGG AGGCGCATCA GGAAATGACC CGGATTATTT TCAATTAGCA ATTACTGGTT TCAGAAACAA TGCTGTTATT TCAGATACAG TAAAAATTAA ATTAGCCGAT TATACTTTTA CTGATAATGC AAAAGATTAT ATTTTAGACA GATGGAAATG GGTAGATCTA AGACCATTGG GTGTTGTAGA TAGCTTAATC TTTCTTTTAA CCTCATCTGA CAATGGTAAT TTTGGAATGA ACACTCCAAA CTATTTTGCA ATAGATCATT TCAATGAACC GCTTTATGAT GTAGCAGTTG CAGATGGCAG TACCCAGGCT TTATCTAAAG ATGATCTATT ATTTAAATCA TGGGCAAATG CAGCTGCTGT AACAAGAGGT TATCAGGATA TTGCAGTAGG TGGGGCATTG GCCAATGTAG GAACAGATGA TAAAGCAACG TTAAAAGCTG ACGGATCAGT CGTATCATTA GGAGATAATG GCGTAGCAAT TCTTGAATTT CAATATCCGG TGATGAACGG TGCAGGCCCT GATTTTGCTG TGTTTGAAAA TGGATTTAAC AACTTCAGCG GTCCGGGACA ATTTCTTGAA TTAGCATTTG TTGAAGTAAG TTCAGATGGT ATAAATTATG TGCGTTTTCC TACCGTTTCA AAAACAAATT CACTTACTCA GATTGGTAGT TTTGGATATA CAGATGCTGC ATTATTGCAC AACCTGGCAG GGAAATATGT GTCAGGATAT GGTACACCAT TTGATCTGGA TGAATTAAAA AATAATACGC TCATAGATGT AAACAATATT ACACATGTAA AAATTATTGA TGTAATCGGA TCAGTTAATT CAGGCATTGC AACAAAAGAT TCATTAGGTA ACCCGGTAAA TGATCCATAC CCAACAGCTT TTGGTTCTGG TGGATTTGAT CTGGATGCAG TAGGTGTAAT TAATCAGAAT GCACTTTCAA CATCTGTAAA AAACACATCC GTGCAAATAA TTCAGGTATA TCCAAACCCA TCTTCAAATA CATTTAATAT ATCTTTATTA AACCAATCGT ACGTTGGTGA ACAATTAACT ATTTTTGATT CTAATGGTAT ACTAATGGCA GATCAGATTG TTTCAGGAAA AGACATCATT GACGCATCTT CATGGAACAA TGGCATCTAC TATATCCGTG TAGGAAATAC AACGCAAAAA ATTATTAAAA TAGACTGA
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Protein sequence | MKKLFTSLLL LTQSVVGFTQ ITSTFESLPL DQTGYWIGAD KSGGFTDGNA YFKNNYSTEY GDGYWEGGFA YSNHTDVTTA GFTNQYSVYT GSGVGHSGKF AIGKDQAIVQ LKNEAKKSPV TGFYVANTTY AVLDMKNGTP TISKKFGGAS GNDPDYFQLA ITGFRNNAVI SDTVKIKLAD YTFTDNAKDY ILDRWKWVDL RPLGVVDSLI FLLTSSDNGN FGMNTPNYFA IDHFNEPLYD VAVADGSTQA LSKDDLLFKS WANAAAVTRG YQDIAVGGAL ANVGTDDKAT LKADGSVVSL GDNGVAILEF QYPVMNGAGP DFAVFENGFN NFSGPGQFLE LAFVEVSSDG INYVRFPTVS KTNSLTQIGS FGYTDAALLH NLAGKYVSGY GTPFDLDELK NNTLIDVNNI THVKIIDVIG SVNSGIATKD SLGNPVNDPY PTAFGSGGFD LDAVGVINQN ALSTSVKNTS VQIIQVYPNP SSNTFNISLL NQSYVGEQLT IFDSNGILMA DQIVSGKDII DASSWNNGIY YIRVGNTTQK IIKID
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