| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1602 |
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| Symbol | mnmA |
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| ID | 4185184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1877446 |
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| End bp | 1878522 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638071595 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_678212 |
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| Protein GI | 110638005 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.1347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.338621 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGGTG GGATAGATAG TTCTGTTGCA GCTGTTATGT TGCATGAACA AGGCTATGAG
GTGATAGGTA TGACCATGAA AACCTGGGAT TATGCAAATC TTGGGGGAAG CAAAAAAGAA
ACCGGATGCT GCAGTTTAGA TTCCATCAAC GATGCCCGCA ATATTGCTGT AAGTTTAGGA
TTTCCGCACT ATATCGTAGA TATCCGGGAA GAATTCGGTG ATTATGTAAT CAACCACTTT
AATAAAGAAT ATCTGGATGG ACGTACGCCC AATCCGTGTG TACTCTGCAA TACGCATATA
AAGTGGGATT CTTTGCTGAG AAGAGCAGAT AAAATGGATT GTGATTTTAT TGCAACCGGC
CACTATGCTC AGGTAAGAAG CGAAAATAAC CGCTTTGTTA TTTCTAAAGG TTTAGATGAA
AACAAAGACC AGTCATATGC CTTGTGGGGA ATATCACAGC AAAGCTTAAG CAGAACAATG
TTCCCGCTGG GACATCTGCA TAAAACAGAT ATCCGTGCCA TGGCTGCTGA ACGTGGCTTC
ATGGATCTGG TGAATAAAAG TGAGTCGTAT GAGATCTGCT TTGTGCCGGA CAATGATTAC
AGAGGTTTTT TGAAACGCCG TAATCCCGGA CTTGAAGAAG AAGTAAGAGG CGGCGAATTT
GTAATGGAAG ATGGAACTGT AGTAGGGAAA CACGAAGGGT ATCCGTTCTA TACCATTGGT
CAGCGCAAGG GATTGGGTAT TACATTGGGT TATCCCGTAT TTGTTACTGA AATTCAAAAA
GAAAATAACC GGGTTGTCTT AGGCAGAGAA GAAGGGTTGA ACCGCAATGG CATGTGGGTA
GATCAGTTAA TCATGTCTAA GTATGAAAAT CTAAAAGGTA TTCAGAAACA ATCGATCACA
AAAGTCCGTT ATAATGATGA TGGTACATCT TCAACAATTG AACAGGTAGG AGATGAAATG
CGTGTATTAT TCCATGAACA TGTAAAGGCA ATAGCGCCGG GGCAAGCAGC TGTTTTTTAT
GAAGGCAACG ATGTGATTGG CGGCGGCTGG ATTAAATCGA GTTTTAAACA GGACTAA
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| Protein sequence | MSGGIDSSVA AVMLHEQGYE VIGMTMKTWD YANLGGSKKE TGCCSLDSIN DARNIAVSLG
FPHYIVDIRE EFGDYVINHF NKEYLDGRTP NPCVLCNTHI KWDSLLRRAD KMDCDFIATG
HYAQVRSENN RFVISKGLDE NKDQSYALWG ISQQSLSRTM FPLGHLHKTD IRAMAAERGF
MDLVNKSESY EICFVPDNDY RGFLKRRNPG LEEEVRGGEF VMEDGTVVGK HEGYPFYTIG
QRKGLGITLG YPVFVTEIQK ENNRVVLGRE EGLNRNGMWV DQLIMSKYEN LKGIQKQSIT
KVRYNDDGTS STIEQVGDEM RVLFHEHVKA IAPGQAAVFY EGNDVIGGGW IKSSFKQD
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