| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1597 |
|---|
| Symbol | |
|---|
| ID | 4185179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 1871326 |
|---|
| End bp | 1872030 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638071590 |
|---|
| Product | 16S ribosomal RNA methyltransferase RsmE |
|---|
| Protein accession | YP_678207 |
|---|
| Protein GI | 110638000 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.269441 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.48223 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCATT TGTTTTTAAA CAAAGACGTT TATTCATGCA TACTTGATGA ACAGGAATCT
GTTCATGTTG TTAAAGTTCT AAGATTAAAA GAAGGTGATG CCATTACTGT AACAAACGGT
AATGGCATTG TTGTTTCGGC ACAGATTACA AAAGCAGACC ATCGTAAGTG CGGATATAAA
ATCATTGAAG AACAAAAATT GAATAAACGG TCTGCCGCAC GCATTCATAT TGCCATTGCT
CCTACCAAGA ACATTGATCG CATGGAATGG CTGGTAGAGA AATGTACCGA GTTTGGCATT
GATGCATTCA GCTTTGTACT TACAGAACAT TCAGAACGAA AAAATTTGCC GGTTGCTAAA
CTTGAGAAAA CGGCTTTTGC TGCAATTAAA CAAAGCGGCC AGCCCTTTCT TCCGCATTTC
AGCGAATTAC TTTCTTTTAC TGCATTTCTG CAATCAGACT TTTCAGACTA TGATTATAAA
TTGATTGCTT GCTTGGATGA AGCTCCTAAA TCAACTATTT TAAAGCTGGT ACAACCAGCC
AAATCCTGTC TGGTATTGAT TGGCCCTGAA GGTGATTTTA CACAGCAGGA AGTCAGATCG
GCTGTTGAAA AAGGATTTGT GAAAATATCC TTAGGAAATT CTATCTTACG AACGGAAACG
GCAGCAATTG CATCCTGCCA TATTTTGAAT CTGATTCAGG AATAA
|
|---|
| Protein sequence | MSHLFLNKDV YSCILDEQES VHVVKVLRLK EGDAITVTNG NGIVVSAQIT KADHRKCGYK
IIEEQKLNKR SAARIHIAIA PTKNIDRMEW LVEKCTEFGI DAFSFVLTEH SERKNLPVAK
LEKTAFAAIK QSGQPFLPHF SELLSFTAFL QSDFSDYDYK LIACLDEAPK STILKLVQPA
KSCLVLIGPE GDFTQQEVRS AVEKGFVKIS LGNSILRTET AAIASCHILN LIQE
|
|---|
| |