Gene CHU_1590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1590 
Symbol 
ID4185172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1863479 
End bp1864072 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content37% 
IMG OID638071583 
Producthypothetical protein 
Protein accessionYP_678200 
Protein GI110637993 
COG category[S] Function unknown 
COG ID[COG3124] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.146525 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTT TAGCACACGT ATTTCTTTCC GGAACAAACC AGTCTTCTAT GATTGGTAAT 
TTTATTGCAG ACTCTGTAAG AGGAAAAGAG ATATTGGAAT TTTCTCCGGA AATTAAAGAA
GGTATTATGC TGCATCGGTT TATAGATCAT TATACCGATA CGCATGCCAT TATCAGTGAA
GGGAAGAAAG TACTTACGCC CTATTTCGGT AAATATAATG CTGTAGTGCT GGATATATAC
ATGGATCATT TTTTAGCAAA GGATTGGGTT AATTATTCAA ATATTCCTTT AGCAGCCTTT
GCTCAGACCA TCTATCAGCA TTTACAAAAT AATTTTGCAC TGTTGCCTGA TCGGGTACAG
GAACTACTGC CGTATATGAT CAGACAGGAC TGGCTTAGCA ATTATGCTAA TTTTTATGGT
ATGGAACGGG TGTTTCAGGG AATGTCGCGT AGAGCTTCTT TTGTGTCTCA TATGGAAGAT
GCAACGGCAG TTCTTCAAAA ACATTATTCA GAAATGCAGC ATTGTTTTGA TTCATTTTTT
CCTGAATTGC AAGGAGCGGT TGCCAATTAT CTTAAAGCAA GCAGCCATAG CTAA
 
Protein sequence
MNFLAHVFLS GTNQSSMIGN FIADSVRGKE ILEFSPEIKE GIMLHRFIDH YTDTHAIISE 
GKKVLTPYFG KYNAVVLDIY MDHFLAKDWV NYSNIPLAAF AQTIYQHLQN NFALLPDRVQ
ELLPYMIRQD WLSNYANFYG MERVFQGMSR RASFVSHMED ATAVLQKHYS EMQHCFDSFF
PELQGAVANY LKASSHS