Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1590 |
Symbol | |
ID | 4185172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1863479 |
End bp | 1864072 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638071583 |
Product | hypothetical protein |
Protein accession | YP_678200 |
Protein GI | 110637993 |
COG category | [S] Function unknown |
COG ID | [COG3124] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.146525 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTTTT TAGCACACGT ATTTCTTTCC GGAACAAACC AGTCTTCTAT GATTGGTAAT TTTATTGCAG ACTCTGTAAG AGGAAAAGAG ATATTGGAAT TTTCTCCGGA AATTAAAGAA GGTATTATGC TGCATCGGTT TATAGATCAT TATACCGATA CGCATGCCAT TATCAGTGAA GGGAAGAAAG TACTTACGCC CTATTTCGGT AAATATAATG CTGTAGTGCT GGATATATAC ATGGATCATT TTTTAGCAAA GGATTGGGTT AATTATTCAA ATATTCCTTT AGCAGCCTTT GCTCAGACCA TCTATCAGCA TTTACAAAAT AATTTTGCAC TGTTGCCTGA TCGGGTACAG GAACTACTGC CGTATATGAT CAGACAGGAC TGGCTTAGCA ATTATGCTAA TTTTTATGGT ATGGAACGGG TGTTTCAGGG AATGTCGCGT AGAGCTTCTT TTGTGTCTCA TATGGAAGAT GCAACGGCAG TTCTTCAAAA ACATTATTCA GAAATGCAGC ATTGTTTTGA TTCATTTTTT CCTGAATTGC AAGGAGCGGT TGCCAATTAT CTTAAAGCAA GCAGCCATAG CTAA
|
Protein sequence | MNFLAHVFLS GTNQSSMIGN FIADSVRGKE ILEFSPEIKE GIMLHRFIDH YTDTHAIISE GKKVLTPYFG KYNAVVLDIY MDHFLAKDWV NYSNIPLAAF AQTIYQHLQN NFALLPDRVQ ELLPYMIRQD WLSNYANFYG MERVFQGMSR RASFVSHMED ATAVLQKHYS EMQHCFDSFF PELQGAVANY LKASSHS
|
| |