Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1580 |
Symbol | pphA |
ID | 4185613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1854858 |
End bp | 1855541 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638071573 |
Product | serine/threonine specific protein phosphatase (protein phosphatase 1) |
Protein accession | YP_678190 |
Protein GI | 110637983 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0522604 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0445956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAACGTA CCTTTGTTAT AGCAGATATT CATGGTTGTT ATAAAAGTTT AAAAGCTTTA GTAGAAAATC AGTTACAGCC AACACATGAA GATCAGTTTA TTTTTTTAGG GGATTATATT GACCGTGGCC CTGATAGTAA AGCTGTTATA AATTATTTGA TATATATAAA AGAACACTAT AAAAACTGTG TCTTTTTAAG AGGGAATCAT GAACAGATGT TTCTGGATGC GCATCAATCG ATAGCCGCGA GAGAGCGCTG GATTATAAAT GGAGGGGAAG AAGTAATGAT TTCCTATGGA TTAAAAAATC ACGACCATGT ACCGTATCAT GTTCAGGATT TCATATCAAA CACCTTTTAT TATTTCCAGG ATGAGCGTTT TATCTTTGTA CATGCAGGCA TAAACCATTT GGCTGAATCC CCGTTGAAAG ATTATAATTC AATGATGTGG ATCAGAAACG CTGAAATAAC ACACACGCTT ACCGGTGGCC GGATTGTTGT TCACGGACAT ACACCAACAC CGCTGGATAC GATTGAAAAA CAGATAGCTT CTGCTTCAAT AAACTTAGAA ATATGTCTGG ATAACGGCTG TGTTTTCAAA GGACAACGCA CCGGTTTAGG AAATCTGCTG GCATTTGAAA CACATTCGAA CAGGTTATAC GTACAAAACA ATATTGACTT TTAA
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Protein sequence | MKRTFVIADI HGCYKSLKAL VENQLQPTHE DQFIFLGDYI DRGPDSKAVI NYLIYIKEHY KNCVFLRGNH EQMFLDAHQS IAARERWIIN GGEEVMISYG LKNHDHVPYH VQDFISNTFY YFQDERFIFV HAGINHLAES PLKDYNSMMW IRNAEITHTL TGGRIVVHGH TPTPLDTIEK QIASASINLE ICLDNGCVFK GQRTGLGNLL AFETHSNRLY VQNNIDF
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