Gene CHU_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1580 
SymbolpphA 
ID4185613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1854858 
End bp1855541 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content37% 
IMG OID638071573 
Productserine/threonine specific protein phosphatase (protein phosphatase 1) 
Protein accessionYP_678190 
Protein GI110637983 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0522604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0445956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAACGTA CCTTTGTTAT AGCAGATATT CATGGTTGTT ATAAAAGTTT AAAAGCTTTA 
GTAGAAAATC AGTTACAGCC AACACATGAA GATCAGTTTA TTTTTTTAGG GGATTATATT
GACCGTGGCC CTGATAGTAA AGCTGTTATA AATTATTTGA TATATATAAA AGAACACTAT
AAAAACTGTG TCTTTTTAAG AGGGAATCAT GAACAGATGT TTCTGGATGC GCATCAATCG
ATAGCCGCGA GAGAGCGCTG GATTATAAAT GGAGGGGAAG AAGTAATGAT TTCCTATGGA
TTAAAAAATC ACGACCATGT ACCGTATCAT GTTCAGGATT TCATATCAAA CACCTTTTAT
TATTTCCAGG ATGAGCGTTT TATCTTTGTA CATGCAGGCA TAAACCATTT GGCTGAATCC
CCGTTGAAAG ATTATAATTC AATGATGTGG ATCAGAAACG CTGAAATAAC ACACACGCTT
ACCGGTGGCC GGATTGTTGT TCACGGACAT ACACCAACAC CGCTGGATAC GATTGAAAAA
CAGATAGCTT CTGCTTCAAT AAACTTAGAA ATATGTCTGG ATAACGGCTG TGTTTTCAAA
GGACAACGCA CCGGTTTAGG AAATCTGCTG GCATTTGAAA CACATTCGAA CAGGTTATAC
GTACAAAACA ATATTGACTT TTAA
 
Protein sequence
MKRTFVIADI HGCYKSLKAL VENQLQPTHE DQFIFLGDYI DRGPDSKAVI NYLIYIKEHY 
KNCVFLRGNH EQMFLDAHQS IAARERWIIN GGEEVMISYG LKNHDHVPYH VQDFISNTFY
YFQDERFIFV HAGINHLAES PLKDYNSMMW IRNAEITHTL TGGRIVVHGH TPTPLDTIEK
QIASASINLE ICLDNGCVFK GQRTGLGNLL AFETHSNRLY VQNNIDF