| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1576 |
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| Symbol | speA |
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| ID | 4185610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1850711 |
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| End bp | 1852003 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638071570 |
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| Product | arginine decarboxylase, biosynthetic |
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| Protein accession | YP_678187 |
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| Protein GI | 110637980 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.584037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0102246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATGTTA TCAATAAATA CGGAACGCCA TTGAAATTAA GTTACCTGCC TAAGATCAGT
TCACAGATCC AAAAAGCAAA ACAATGGTTC GGCGAAGCCA TTACGAATAA TAATTATTCG
GGAACGTATA CATATTGCTA CTGTACCAAA TCTTCGCATT TCAGTTTTGT ATTGAACGAA
GCATTGAAGA ATGACATACA TATTGAAACC TCTTCTGCTT ACGATATTCC GATTGTTCGT
ATTTTATTCG AGAACAATAA AATTACGAAA GCAACCAATG TGATCTGCAA TGGATATAAG
CGCCCGGAAT ACACAGACTA CATCTGTGAT CTGATAAACG AAGGCTTTAA CTGCACACCT
ATTTTAGACA ACCTGGATGA AATTACAGCT TATGAAAAAG GTATTGAAAC AAGTTGTAAT
TTAGGTATCC GTCTGGCAAC GGATGAAGAG CCGAAGTTTG AATTCTATAC GTCACGCCTG
GGTTTCAGAT ACAACGATGT GGTTCAGTTC TACAAAGAAA AAATTGAGCC GAATCCGAAG
TTCAAATTGA AAATGCTGCA CTTCTTTATT AATACGGGTA TTAAAGATAC CACGTACTAC
TGGAGTGAGT TGAGCCGTTT TGTACACATG TACTGTACGA TGAAAAAGAT TAATCCGGAT
ATGGACAGCA TTGATATTGG TGGCGGCTGG CCGATCAAAA CATCTGTGCA TTTCGAATAC
GACTATAAAT ATATGGCAGA CCAGATTGTA AAAACAATCA AGAAGGTGTG TGATGAAGAA
GGTGTACCAA CACCGAATAT TTTCACAGAA TTCGGCAGCT TTACCGTGGG AGAAAGCGGC
GCTGCGGTAT ACTCCGTTTT AGGAAGCAAA CTTCAGAACG ATAAAGAAGA ATGGTATATG
ATTGACAGTT CATTCATTAC TACGCTTCCG GATGTATGGG GCTTAAGCCA GAAGTATTTA
TTACTGGCAG TGAACGGCTG GGATAAACCA TATAAAAAAG TTAAGCTTGG CGGTATTACC
TGCGACAGCA TGGATTATTA CAATTCAGAA GCACACCAGA ACCTGGTGTT CATGCCGGAA
CTGGATGAGA AAGAACCTAC ATACATTGGT TTCTTCCATA CCGGTGCTTA TCAGGAATCA
CTTGGCGGAT ACGGTGGTAT ACAGCATTGC CTGGTACCGG CACCGAAACA TATTTTAATT
GATAAAGATG CGGATGGTAA TTTCAGCTAT AACTTGTTTG CACCGGAGCA GACAAAAGAA
AGCATGCTGA AAATATTGGG CTACAAAGCT TAA
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| Protein sequence | MDVINKYGTP LKLSYLPKIS SQIQKAKQWF GEAITNNNYS GTYTYCYCTK SSHFSFVLNE
ALKNDIHIET SSAYDIPIVR ILFENNKITK ATNVICNGYK RPEYTDYICD LINEGFNCTP
ILDNLDEITA YEKGIETSCN LGIRLATDEE PKFEFYTSRL GFRYNDVVQF YKEKIEPNPK
FKLKMLHFFI NTGIKDTTYY WSELSRFVHM YCTMKKINPD MDSIDIGGGW PIKTSVHFEY
DYKYMADQIV KTIKKVCDEE GVPTPNIFTE FGSFTVGESG AAVYSVLGSK LQNDKEEWYM
IDSSFITTLP DVWGLSQKYL LLAVNGWDKP YKKVKLGGIT CDSMDYYNSE AHQNLVFMPE
LDEKEPTYIG FFHTGAYQES LGGYGGIQHC LVPAPKHILI DKDADGNFSY NLFAPEQTKE
SMLKILGYKA
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