| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1573 |
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| Symbol | lgtD |
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| ID | 4185607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1847868 |
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| End bp | 1848614 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638071567 |
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| Product | b-glycosyltransferase |
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| Protein accession | YP_678184 |
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| Protein GI | 110637977 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0763842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.209527 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAAAA ATCTCGTAAT TGTTCCTACA TACAACGAAA TTGAAAACAT AGGCTTGCTT
ATTGATAAAG TAATGACTTT GTCCACGCCA TTTGATATTC TGGTTATTGA AGATAATTCT
CCGGATGGTA CAGCAGAACT CGTAAAAGAG TATGCGGTAA AATATCCGGA TCGTGTATTT
ATGATTCAGC GCCAGGGCAA GTTGGGTTTA GGAACAGCAT ACATTGAGGG TTTTACATAC
GGCATCAATC ACAGGTATGA TTATTTATGT GAAATGGATG CTGATTTTTC CCATAATCCG
GAAGACCTGA TCCGTTTACA CGACACATGC GAAAATAACG GTGCTGATGT AGCAATCGGA
AGCCGCTATG TACATGGTGT AACCGTTATC AACTGGCCGA TCGGCAGAGT ACTGATGTCT
TTCTTCGCCA GTAAATATGT ACAGTTAATT ACCGGTATGC CGATTGAAGA TGCTACGGCT
GGTTTTAAAT GTTACAGCAG AAAAGTATTA GAAACCATTC CATATACAAA AGTAAAATTT
GTAGGTTATG CCTTCCAGAT CCAGATGAAA TTTTTATGCT GGAAGTATGG ATTTATATTA
AAAGAAGTGC CGATCATTTT TATGGATCGT ACGCGCGGCA CCTCAAAAAT GTCGATGGGC
ATTTTTAAAG AAGCAATCTT TGGCGTGATT ATGATGAAAT TTAAAAGTTT GTTTCAAACG
TTCCATCCGC AGGCAGATAG TAAATAA
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| Protein sequence | MSKNLVIVPT YNEIENIGLL IDKVMTLSTP FDILVIEDNS PDGTAELVKE YAVKYPDRVF
MIQRQGKLGL GTAYIEGFTY GINHRYDYLC EMDADFSHNP EDLIRLHDTC ENNGADVAIG
SRYVHGVTVI NWPIGRVLMS FFASKYVQLI TGMPIEDATA GFKCYSRKVL ETIPYTKVKF
VGYAFQIQMK FLCWKYGFIL KEVPIIFMDR TRGTSKMSMG IFKEAIFGVI MMKFKSLFQT
FHPQADSK
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