Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1571 |
Symbol | |
ID | 4185605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1845055 |
End bp | 1846329 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638071565 |
Product | hypothetical protein |
Protein accession | YP_678182 |
Protein GI | 110637975 |
COG category | [S] Function unknown |
COG ID | [COG3876] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0240807 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.246584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACTCAC ATTCAAATAT ACAGATTTCT ATGCGTATTA AAGGATTCTT ATCGGGGATA ATTATTGGAT TACCTTTATA TCTGATTTTT TCATGCTCTT CTACTCCATC CACCAATCAA ATCCCTGCTT CGCCCGCTAA AGTAAGCCAT GCAGATTCAA GTCAAACGGC CCCGCCGCTT AAAACAGGTG CTGAACGTCT GGAAAAATAC ATGGCGTTAT TAAAGAATAA AAAAGTAGCC TTGGTAGTTA ACCAAACAGC CATGGTTAAA CAGACACATT TAGTGGATAC ACTTTTAGCA CTTGGTGTAA ACATTAAAAA AATATTAGCT CCTGAACATG GTTTCAGAGG CACTGCCGAT GCCGGCGAAC ATGTAAGTTC CTATGTAGAT AAAAAAACAG GCTTGCCTGT GGTGTCCTTA TATGGGGCAA ATAAAAAACC TTCCTCTGAA CAATTAGCAG ACATCGATAT TGTCGTTTAT GACATTCAGG ATGTTGGCGT ACGTTTTTTT ACCTATATCT CAACGCTGTA TGTGGTAATG GAAAGCTGTG CTGAAAATAA AAAAGAATTG CTGGTACTGG ACAGACCAAA CCCAAATGGT GACTATGTAG ATGGGCCTGT GCTGGATATG AAATTAAAAT CCTTTATAGG CATGCTGCCG CTTCCGGTGG TTCATGGCTT AACTGTAGGG GAATTAACAC AAATGATACA AGGGGAAAAA TGGCTAAAGG ACAGTTTGGT TTGTAAGTAC ACGGTTATAC CGGTTGATAA TTATACACAC ACCACAGAAT ATATTTTACC GATAAAACCC TCTCCCAACA TGCCCAATAA TCAAGCGATC CGCTTGTATC CTTCCTTAGG CTTATTCGAA GGAACAAACG TAAGCGTTGG CCGCGGCACG TACTTTCCAT TTCAGGTTAT TGGCTCTCCA TTTACAACAG ATACGGCCTT TTCATTTATC CCGGTTAGTA TAGACGGCAT GTCAAAAGAC CCGATGCATA TGAATAAAAA ATGTTACGGA TTTGACCTGA GAAAAACCAC GTATAAAAAA GAATTTGATC TGAGTTATGT GATCAATATG TATGCTTTGA CGAGCGATAA AGCCGGGTAT TTTGGAAAGA ATAATTTCTT TGATAAGCTT GCCGGCACAA CGTTATTAAA GCAGCAGATC ATAGAAAAAA AATCTGCTGC CGAAATAAAA CAAACCTGGC AAAAAGACCT GGCCGTTTAT AAGGCCATGC GTAAAAAATA TTTATTGTAC ACAGACTTTG AATAA
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Protein sequence | MYSHSNIQIS MRIKGFLSGI IIGLPLYLIF SCSSTPSTNQ IPASPAKVSH ADSSQTAPPL KTGAERLEKY MALLKNKKVA LVVNQTAMVK QTHLVDTLLA LGVNIKKILA PEHGFRGTAD AGEHVSSYVD KKTGLPVVSL YGANKKPSSE QLADIDIVVY DIQDVGVRFF TYISTLYVVM ESCAENKKEL LVLDRPNPNG DYVDGPVLDM KLKSFIGMLP LPVVHGLTVG ELTQMIQGEK WLKDSLVCKY TVIPVDNYTH TTEYILPIKP SPNMPNNQAI RLYPSLGLFE GTNVSVGRGT YFPFQVIGSP FTTDTAFSFI PVSIDGMSKD PMHMNKKCYG FDLRKTTYKK EFDLSYVINM YALTSDKAGY FGKNNFFDKL AGTTLLKQQI IEKKSAAEIK QTWQKDLAVY KAMRKKYLLY TDFE
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