Gene CHU_1571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1571 
Symbol 
ID4185605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1845055 
End bp1846329 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content39% 
IMG OID638071565 
Producthypothetical protein 
Protein accessionYP_678182 
Protein GI110637975 
COG category[S] Function unknown 
COG ID[COG3876] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0240807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.246584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTCAC ATTCAAATAT ACAGATTTCT ATGCGTATTA AAGGATTCTT ATCGGGGATA 
ATTATTGGAT TACCTTTATA TCTGATTTTT TCATGCTCTT CTACTCCATC CACCAATCAA
ATCCCTGCTT CGCCCGCTAA AGTAAGCCAT GCAGATTCAA GTCAAACGGC CCCGCCGCTT
AAAACAGGTG CTGAACGTCT GGAAAAATAC ATGGCGTTAT TAAAGAATAA AAAAGTAGCC
TTGGTAGTTA ACCAAACAGC CATGGTTAAA CAGACACATT TAGTGGATAC ACTTTTAGCA
CTTGGTGTAA ACATTAAAAA AATATTAGCT CCTGAACATG GTTTCAGAGG CACTGCCGAT
GCCGGCGAAC ATGTAAGTTC CTATGTAGAT AAAAAAACAG GCTTGCCTGT GGTGTCCTTA
TATGGGGCAA ATAAAAAACC TTCCTCTGAA CAATTAGCAG ACATCGATAT TGTCGTTTAT
GACATTCAGG ATGTTGGCGT ACGTTTTTTT ACCTATATCT CAACGCTGTA TGTGGTAATG
GAAAGCTGTG CTGAAAATAA AAAAGAATTG CTGGTACTGG ACAGACCAAA CCCAAATGGT
GACTATGTAG ATGGGCCTGT GCTGGATATG AAATTAAAAT CCTTTATAGG CATGCTGCCG
CTTCCGGTGG TTCATGGCTT AACTGTAGGG GAATTAACAC AAATGATACA AGGGGAAAAA
TGGCTAAAGG ACAGTTTGGT TTGTAAGTAC ACGGTTATAC CGGTTGATAA TTATACACAC
ACCACAGAAT ATATTTTACC GATAAAACCC TCTCCCAACA TGCCCAATAA TCAAGCGATC
CGCTTGTATC CTTCCTTAGG CTTATTCGAA GGAACAAACG TAAGCGTTGG CCGCGGCACG
TACTTTCCAT TTCAGGTTAT TGGCTCTCCA TTTACAACAG ATACGGCCTT TTCATTTATC
CCGGTTAGTA TAGACGGCAT GTCAAAAGAC CCGATGCATA TGAATAAAAA ATGTTACGGA
TTTGACCTGA GAAAAACCAC GTATAAAAAA GAATTTGATC TGAGTTATGT GATCAATATG
TATGCTTTGA CGAGCGATAA AGCCGGGTAT TTTGGAAAGA ATAATTTCTT TGATAAGCTT
GCCGGCACAA CGTTATTAAA GCAGCAGATC ATAGAAAAAA AATCTGCTGC CGAAATAAAA
CAAACCTGGC AAAAAGACCT GGCCGTTTAT AAGGCCATGC GTAAAAAATA TTTATTGTAC
ACAGACTTTG AATAA
 
Protein sequence
MYSHSNIQIS MRIKGFLSGI IIGLPLYLIF SCSSTPSTNQ IPASPAKVSH ADSSQTAPPL 
KTGAERLEKY MALLKNKKVA LVVNQTAMVK QTHLVDTLLA LGVNIKKILA PEHGFRGTAD
AGEHVSSYVD KKTGLPVVSL YGANKKPSSE QLADIDIVVY DIQDVGVRFF TYISTLYVVM
ESCAENKKEL LVLDRPNPNG DYVDGPVLDM KLKSFIGMLP LPVVHGLTVG ELTQMIQGEK
WLKDSLVCKY TVIPVDNYTH TTEYILPIKP SPNMPNNQAI RLYPSLGLFE GTNVSVGRGT
YFPFQVIGSP FTTDTAFSFI PVSIDGMSKD PMHMNKKCYG FDLRKTTYKK EFDLSYVINM
YALTSDKAGY FGKNNFFDKL AGTTLLKQQI IEKKSAAEIK QTWQKDLAVY KAMRKKYLLY
TDFE