| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1549 |
|---|
| Symbol | dnaN |
|---|
| ID | 4185719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 1805812 |
|---|
| End bp | 1806936 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638071543 |
|---|
| Product | DNA polymerase III, beta subunit |
|---|
| Protein accession | YP_678160 |
|---|
| Protein GI | 110637953 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
|---|
| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.15445 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTG TCGTTTCTTC AAATGCTTTA CTTAAGCAAC TAACTGCCAT AAATGGTGTT
ATTACAACCA ATCCGGTAGT GCCTATTCTG GAAAATTTTC TATTTGAAAT TGGAGATGGA
ATGCTGGTTG TTTATGCTTC TGATCTTCAA ACGTCAATGA TTACTGAAAT CGCTGTTGAG
GCGAAAGCAA AGGGTAGTAT TGCAGTACCG GCTAAGATTT TGCTGGATAC ATTGAAAAAC
TTACCTGAAC AGCCGGTAAC ATTTACAATT GATCCTGAAA CATATAGCAT CGAGATCAGC
TCAGATAACG GTCGTTATAA ACTTTCAGGT GAAAACGCTA CAGATTTCCC TAAAGTGCCT
GGTGTTAAAA ATGGCTACAG CGTAGATATC TCAACTGAAA TATTAAACCG TGCTATTTCT
TCTACCATCT TTGCTGCCAG CAACGATGAA TTGAAACCGG CAATGACAGG TGTATACGTT
TCATTAACGG AATCTAATGC AACATTTGTT GCTACAGACG GTCACCGTTT GATCCGTTAC
AGACGTACGG ATATCGTGTC TGAAATGGCC AATACATTGA TTATTCCTAA AAAGGCATTG
AACTTATTAA AAGCTTCTTT ACCTTCAGAA AATACCAATG TTAAAATTGA ATACAATGCA
TCCAATGCAT TCTTCAGCTT TAACAATATT AAAATGATTT GTCGTTTGAT CGATGAGCGT
TTCCCGGATT ACGAAAACGC AATTCCGGTA GACAATCCGA ATGTTCTTAC AATTACAAGA
ACGGATATGA TGAATTCATT AAAACGTATT TCGATCTATG CGAACAAAAC AACGCATCAG
GTTCGTTTGA AATTAGCAGG AAGTGAATTG CAGATTTCTG CAGAAGATTT GGATTTCTCC
AACGAAGCAA ATGAGCGTTT AGCGTGTGAG TTTGAAGGTC AGGATATGGA AATCGGTTTC
AACGCGAAGT TCCTGGTTGA AATGTTAAGC AACCTGGATA GCCCGCAGAT CTCCATGCAT
TTCTCTGCAC CGAACAGAGC CGGTATTATC ACTCCGGCCG ATAAAGATGA ACACGAAGAT
GTATTGATGC TTGTTATGCC GGTAATGTTA AACAGTTACG CATAA
|
|---|
| Protein sequence | MKFVVSSNAL LKQLTAINGV ITTNPVVPIL ENFLFEIGDG MLVVYASDLQ TSMITEIAVE
AKAKGSIAVP AKILLDTLKN LPEQPVTFTI DPETYSIEIS SDNGRYKLSG ENATDFPKVP
GVKNGYSVDI STEILNRAIS STIFAASNDE LKPAMTGVYV SLTESNATFV ATDGHRLIRY
RRTDIVSEMA NTLIIPKKAL NLLKASLPSE NTNVKIEYNA SNAFFSFNNI KMICRLIDER
FPDYENAIPV DNPNVLTITR TDMMNSLKRI SIYANKTTHQ VRLKLAGSEL QISAEDLDFS
NEANERLACE FEGQDMEIGF NAKFLVEMLS NLDSPQISMH FSAPNRAGII TPADKDEHED
VLMLVMPVML NSYA
|
|---|
| |