| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1546 |
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| Symbol | gldF |
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| ID | 4185716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1802370 |
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| End bp | 1803098 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638071540 |
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| Product | ABC transporter permease; gliding motility-associated protein |
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| Protein accession | YP_678157 |
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| Protein GI | 110637950 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component |
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| TIGRFAM ID | [TIGR03518] gliding motility-associated ABC transporter permease protein GldF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000000287593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGGAGTA TATTCCGGAA AGAAATAGCC GTATTCCTTA ATTCTTTAAT TGCTTATTTA
GTAATACTTG TCTTCTTAAC CTTTATTGGT GTGTTCATGT GGGTATTGCC TGCAAGCAGT
ATTCTTGACT ATGGGTATGC AGAAATGGAT ACACTGTTTT CCTATGGCCC ATTAGCATTT
TTATTATTGA TCCCAGCTAT CACGATGCGT TCTTTTGCAG AAGAGAAAAA AGACGGCACG
ATTGAACTGC TGTTAACAAA GCCTCTCAGC GACTGGCAGC TATTATTGGG TAAATACCTG
TCGGCATGTA CACTGGTTGC TTTGGCATTG ATCCCGACAG TCTTATATTA TATTTCCGTA
TATCAATTAG GCAAGCCCGT TGGTAATATT GATTCAGCTG CAGTTGGTTC TTCGTATATC
GGTTTGTTTT TATTAGGTTG TGTCTATACA TCTGCCGGTA TCTTTGCATC GAGTATCAGT
ACCAATCAGA TTGTGTCCTT TATCATTGCC TTGTTATTGT GTTACCTGAT CTATAGCGGA
TTTGATCACC TTGCCAGTTT AGACTTATGG GAAGGCTCTG CAGTAACCTT GTTACCGTTC
GGACTGGATT ATCATTACAA TGCATTAAGT AAAGGTGTTG TTGATTCCAG AAATGTATGT
TACTTTTTAA CCGTGATAGG CATCATGCTT CTATCAACCA AAATTATTTT AGAAAGCAGA
AAGTGGTAA
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| Protein sequence | MWSIFRKEIA VFLNSLIAYL VILVFLTFIG VFMWVLPASS ILDYGYAEMD TLFSYGPLAF
LLLIPAITMR SFAEEKKDGT IELLLTKPLS DWQLLLGKYL SACTLVALAL IPTVLYYISV
YQLGKPVGNI DSAAVGSSYI GLFLLGCVYT SAGIFASSIS TNQIVSFIIA LLLCYLIYSG
FDHLASLDLW EGSAVTLLPF GLDYHYNALS KGVVDSRNVC YFLTVIGIML LSTKIILESR
KW
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