Gene CHU_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1545 
SymbolgldA 
ID4185715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1801444 
End bp1802361 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content41% 
IMG OID638071539 
ProductABC-type multidrug transporter, ATP-binding protein; gliding motility-associated protein 
Protein accessionYP_678156 
Protein GI110637949 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID[TIGR03522] gliding motility-associated ABC transporter ATP-binding subunit GldA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000116898 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTAA TTGTAAAAGA CCTTGTTAAG ATATATGGGA AACAATATGC TGTTGATGGT 
ATATCCTTTA CAGCAGAAAA AGGCCGCATT ACAGGATTCT TAGGTCCGAA CGGAGCCGGC
AAGTCTACCA CGATGAAAGT TGCTACGTGT TTTATTCCGC CTTCTTCAGG AACCATTGAA
GTGTGTGGTT ACAGTGTACT TGAATCGCCC ATTGAAGTAA GACGTAATAT CGGGTACTTA
CCCGAACACA ATCCCTTGTA TCTGGATATG TATGTACAGG AATATCTTCA GTTTATCGGA
GGGATGTACG GCATGAAAGA TACAGCCCTC AAAAAGCGTG TTGCTCAAAT GATCGAGCTA
TGCGGGTTGG GAGTGGAGCA ATATAAAAAG CTTGGTGCCT TATCAAAAGG ATATCGCCAG
CGTGCAGGCC TGGCACAGGC ACTGATTCAT GATCCGCAGG TATTGATATT GGATGAACCT
ACAACCGGTT TAGATCCAAA TCAGATCCTG GAGATTCGTA AAGTAATTAA AAGTATTGCC
AAAGATAAGA CGGTAATTTT TTCAACCCAT ATCATGCAGG AAGTACAGGC CTTATGCGAT
CAGGTCATTA TTATCAATCG AGGAAAAATC GTAGCAGATA AAACAATTAC GGAGATCCGT
AATTTCAATA CATCTATTAA AATCATCCGC CTGGAGTTTA CCGAGCAAGT GGATATACAG
GCGTTTAAAA TATTTGATTT TGTTTCTGAT GCCAGACACA TGCAGGGCAA TGCATATGAA
CTGGTTGTTG CTACCCATGC AGATACACGT CCGCTTATCT TTAAAGCCTG TGCAGACAAA
GGCTGGACGC TTATTGAAAT GAAAGTGGAA GAACAATCGT TGGAGAGTGT GTTCAGAGAA
TTAACTTCTA AAATATAA
 
Protein sequence
MSVIVKDLVK IYGKQYAVDG ISFTAEKGRI TGFLGPNGAG KSTTMKVATC FIPPSSGTIE 
VCGYSVLESP IEVRRNIGYL PEHNPLYLDM YVQEYLQFIG GMYGMKDTAL KKRVAQMIEL
CGLGVEQYKK LGALSKGYRQ RAGLAQALIH DPQVLILDEP TTGLDPNQIL EIRKVIKSIA
KDKTVIFSTH IMQEVQALCD QVIIINRGKI VADKTITEIR NFNTSIKIIR LEFTEQVDIQ
AFKIFDFVSD ARHMQGNAYE LVVATHADTR PLIFKACADK GWTLIEMKVE EQSLESVFRE
LTSKI