Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1545 |
Symbol | gldA |
ID | 4185715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1801444 |
End bp | 1802361 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638071539 |
Product | ABC-type multidrug transporter, ATP-binding protein; gliding motility-associated protein |
Protein accession | YP_678156 |
Protein GI | 110637949 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | [TIGR03522] gliding motility-associated ABC transporter ATP-binding subunit GldA |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000116898 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTAA TTGTAAAAGA CCTTGTTAAG ATATATGGGA AACAATATGC TGTTGATGGT ATATCCTTTA CAGCAGAAAA AGGCCGCATT ACAGGATTCT TAGGTCCGAA CGGAGCCGGC AAGTCTACCA CGATGAAAGT TGCTACGTGT TTTATTCCGC CTTCTTCAGG AACCATTGAA GTGTGTGGTT ACAGTGTACT TGAATCGCCC ATTGAAGTAA GACGTAATAT CGGGTACTTA CCCGAACACA ATCCCTTGTA TCTGGATATG TATGTACAGG AATATCTTCA GTTTATCGGA GGGATGTACG GCATGAAAGA TACAGCCCTC AAAAAGCGTG TTGCTCAAAT GATCGAGCTA TGCGGGTTGG GAGTGGAGCA ATATAAAAAG CTTGGTGCCT TATCAAAAGG ATATCGCCAG CGTGCAGGCC TGGCACAGGC ACTGATTCAT GATCCGCAGG TATTGATATT GGATGAACCT ACAACCGGTT TAGATCCAAA TCAGATCCTG GAGATTCGTA AAGTAATTAA AAGTATTGCC AAAGATAAGA CGGTAATTTT TTCAACCCAT ATCATGCAGG AAGTACAGGC CTTATGCGAT CAGGTCATTA TTATCAATCG AGGAAAAATC GTAGCAGATA AAACAATTAC GGAGATCCGT AATTTCAATA CATCTATTAA AATCATCCGC CTGGAGTTTA CCGAGCAAGT GGATATACAG GCGTTTAAAA TATTTGATTT TGTTTCTGAT GCCAGACACA TGCAGGGCAA TGCATATGAA CTGGTTGTTG CTACCCATGC AGATACACGT CCGCTTATCT TTAAAGCCTG TGCAGACAAA GGCTGGACGC TTATTGAAAT GAAAGTGGAA GAACAATCGT TGGAGAGTGT GTTCAGAGAA TTAACTTCTA AAATATAA
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Protein sequence | MSVIVKDLVK IYGKQYAVDG ISFTAEKGRI TGFLGPNGAG KSTTMKVATC FIPPSSGTIE VCGYSVLESP IEVRRNIGYL PEHNPLYLDM YVQEYLQFIG GMYGMKDTAL KKRVAQMIEL CGLGVEQYKK LGALSKGYRQ RAGLAQALIH DPQVLILDEP TTGLDPNQIL EIRKVIKSIA KDKTVIFSTH IMQEVQALCD QVIIINRGKI VADKTITEIR NFNTSIKIIR LEFTEQVDIQ AFKIFDFVSD ARHMQGNAYE LVVATHADTR PLIFKACADK GWTLIEMKVE EQSLESVFRE LTSKI
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