Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1544 |
Symbol | |
ID | 4185714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1800677 |
End bp | 1801246 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638071538 |
Product | hypothetical protein |
Protein accession | YP_678155 |
Protein GI | 110637948 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0001225 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTATTTTA TGAAAAAATT ACTTTTAGTA TTCAGTACTA TTTTAATCAT TCAGACAACC AGCGCTCAGA AACTTATTAC TTTTGGACCT TTGGCCGGAT ATACCGCCAG TGTATTAGAA AATTCTGACT ACCCGAACAG CACACCCGGC TCCGGTTATG TATTTGGTGG CTTTATACGA GCCGATATAA AAAAATGGTA TATACAGCCC AATATTTATT ATATGTACAA TTCCTCTTCG ATTGATGTAA ATCAAACAAG CACAGATGTA AAATCAAAAA GTGTGAACGG AGATGTATTA CTTGGATACC GGTTCTTTAA GTTTACCGAT CTTACTTACC TGCGCCTGTT TGCAGGCCCG GGCTATTCAA ATATTAATAC ATTGAAATAT GATTCCTGTA CTTCTGACTA TTCAACAGAC AATATCCTTC TCAATGCCGG TGTAGGCCTT GATTTCTGGA AGCTGACGTT TGATCTGAAA TATCAAAGAG GATTGACAGA TATTGACAAG TCATCGAACA CCATGCATAC AAGCTTGTTT ATGCTGACAG CAGGATTCAA AATATTATAA
|
Protein sequence | MYFMKKLLLV FSTILIIQTT SAQKLITFGP LAGYTASVLE NSDYPNSTPG SGYVFGGFIR ADIKKWYIQP NIYYMYNSSS IDVNQTSTDV KSKSVNGDVL LGYRFFKFTD LTYLRLFAGP GYSNINTLKY DSCTSDYSTD NILLNAGVGL DFWKLTFDLK YQRGLTDIDK SSNTMHTSLF MLTAGFKIL
|
| |