Gene CHU_1537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1537 
Symbol 
ID4184515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1790909 
End bp1791943 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content38% 
IMG OID638071531 
Producthypothetical protein 
Protein accessionYP_678148 
Protein GI110637941 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.466776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.951584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA CCAGTTCTGC TCCGGATAAA GTATTAAAAG ACCTTAAGGA AGGTAAATAC 
GCTCCTGTAT ATTTTTTGCA GGGAGAGGAA CCCTATTTTA TAGATCTAAT ATCCAGTTAT
ATAGAAAATA ACTGTTTGCC GGAATCGGAG AGAGGATTTA ATCAGACGAT CCTGTATGGC
AAAGATACCA ATGTTTCTAC CATTCTTCAG AATGCCCGCA AGTATCCGAT GTTTTCGGAA
AGGCAGGTAG TAATGGTTAA GGAAGCACAG GATGTTTCGG ATCTGACCAA AGATTCAACA
GAGAAATTTT TAATGGCATA TCTCGAAAAT CCATTGCCTA CAACCATTCT GGTATTTTGC
CACAAGTATA AAAAACTGGA TGCCCGTAAA AAAATAACCA AGCACCTGCA GAAGTATTCG
GTGTTTGTTG AATCTGCCAA ACTTTACGAT AATAAATTGC CTGAATGGAT TAATGGCTAT
TTCAGGGAAA AGAATTACAG GATTGATCCG AAGGCGGTCG TTCTATTGGC CGAATCTATT
GGTACGGATC TTTCCCGAAT GGCAAATGAA ATTGATAAGC TGCTCATCAA CGTTAAAGAT
CCTGCTATAA CCATCACCGA AGATTTAATC GAAAAATATG TTGGCGTGAG CAAAGAATAC
AATGTCTTTG AATTACAAAA AGCTATCGGT GTACGGGATA TAATAAAAGC GAATAAAATC
GTTAATCATT TTGAATCCAA TCCAAAAGCG AATCCGATTG TAATGGTGCT GTCAAGTTTG
TTTACTTACT ATCTTAAAAT ACTGGCGATT CATGCCGCCA CAGATAAGAG TGAAGCAAGC
CTGGCAAAGG TTGTTGGTGT ACATCCATTC TTTGTAAAAG AATACATCAA TGCGTCGCGC
ATCAATGATA TTAATAAATG CATCTCTTGT GTGCGCGCCA TTCGTGAAGC GGACAAAATG
GTGAAAGGGT ATACGGTTGT TAATGTTACC GATGGCTTTA TTTTAAAAGA ATTATTGTTT
AAATTATTAC ATTGA
 
Protein sequence
MAETSSAPDK VLKDLKEGKY APVYFLQGEE PYFIDLISSY IENNCLPESE RGFNQTILYG 
KDTNVSTILQ NARKYPMFSE RQVVMVKEAQ DVSDLTKDST EKFLMAYLEN PLPTTILVFC
HKYKKLDARK KITKHLQKYS VFVESAKLYD NKLPEWINGY FREKNYRIDP KAVVLLAESI
GTDLSRMANE IDKLLINVKD PAITITEDLI EKYVGVSKEY NVFELQKAIG VRDIIKANKI
VNHFESNPKA NPIVMVLSSL FTYYLKILAI HAATDKSEAS LAKVVGVHPF FVKEYINASR
INDINKCISC VRAIREADKM VKGYTVVNVT DGFILKELLF KLLH