Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1537 |
Symbol | |
ID | 4184515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1790909 |
End bp | 1791943 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638071531 |
Product | hypothetical protein |
Protein accession | YP_678148 |
Protein GI | 110637941 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1466] DNA polymerase III, delta subunit |
TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.466776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.951584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGAAA CCAGTTCTGC TCCGGATAAA GTATTAAAAG ACCTTAAGGA AGGTAAATAC GCTCCTGTAT ATTTTTTGCA GGGAGAGGAA CCCTATTTTA TAGATCTAAT ATCCAGTTAT ATAGAAAATA ACTGTTTGCC GGAATCGGAG AGAGGATTTA ATCAGACGAT CCTGTATGGC AAAGATACCA ATGTTTCTAC CATTCTTCAG AATGCCCGCA AGTATCCGAT GTTTTCGGAA AGGCAGGTAG TAATGGTTAA GGAAGCACAG GATGTTTCGG ATCTGACCAA AGATTCAACA GAGAAATTTT TAATGGCATA TCTCGAAAAT CCATTGCCTA CAACCATTCT GGTATTTTGC CACAAGTATA AAAAACTGGA TGCCCGTAAA AAAATAACCA AGCACCTGCA GAAGTATTCG GTGTTTGTTG AATCTGCCAA ACTTTACGAT AATAAATTGC CTGAATGGAT TAATGGCTAT TTCAGGGAAA AGAATTACAG GATTGATCCG AAGGCGGTCG TTCTATTGGC CGAATCTATT GGTACGGATC TTTCCCGAAT GGCAAATGAA ATTGATAAGC TGCTCATCAA CGTTAAAGAT CCTGCTATAA CCATCACCGA AGATTTAATC GAAAAATATG TTGGCGTGAG CAAAGAATAC AATGTCTTTG AATTACAAAA AGCTATCGGT GTACGGGATA TAATAAAAGC GAATAAAATC GTTAATCATT TTGAATCCAA TCCAAAAGCG AATCCGATTG TAATGGTGCT GTCAAGTTTG TTTACTTACT ATCTTAAAAT ACTGGCGATT CATGCCGCCA CAGATAAGAG TGAAGCAAGC CTGGCAAAGG TTGTTGGTGT ACATCCATTC TTTGTAAAAG AATACATCAA TGCGTCGCGC ATCAATGATA TTAATAAATG CATCTCTTGT GTGCGCGCCA TTCGTGAAGC GGACAAAATG GTGAAAGGGT ATACGGTTGT TAATGTTACC GATGGCTTTA TTTTAAAAGA ATTATTGTTT AAATTATTAC ATTGA
|
Protein sequence | MAETSSAPDK VLKDLKEGKY APVYFLQGEE PYFIDLISSY IENNCLPESE RGFNQTILYG KDTNVSTILQ NARKYPMFSE RQVVMVKEAQ DVSDLTKDST EKFLMAYLEN PLPTTILVFC HKYKKLDARK KITKHLQKYS VFVESAKLYD NKLPEWINGY FREKNYRIDP KAVVLLAESI GTDLSRMANE IDKLLINVKD PAITITEDLI EKYVGVSKEY NVFELQKAIG VRDIIKANKI VNHFESNPKA NPIVMVLSSL FTYYLKILAI HAATDKSEAS LAKVVGVHPF FVKEYINASR INDINKCISC VRAIREADKM VKGYTVVNVT DGFILKELLF KLLH
|
| |