| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1521 |
|---|
| Symbol | |
|---|
| ID | 4183999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 1755497 |
|---|
| End bp | 1760920 |
|---|
| Gene Length | 5424 bp |
|---|
| Protein Length | 1807 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638071515 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_678132 |
|---|
| Protein GI | 110637925 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.442861 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0305188 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTAC GATTAGCAAA GCATCAGCGC ATAATAGCTT CTTTTCTGTT AATTAATTTT
TTAACATTCT TTATTCCGAT TCAAAGCAAA GCTTTGTCGT CAGGCCCATC ACAGCCAGAA
ACGCAGCAGT TTGCTCCTGC CGGAATGGAT GACATGGTTG ACCCGTTTAC GGGCGACTTC
AGTTACAACA TTCCGTTAAT GGATGTAGGC GGCTATCCGA TCAATTTAAA TTATGCCTCC
GGTATTACAC CCGATGCTGA AGCTAGCTGG ACAGGCTTGG GCTGGAACTT AAATGTAGGG
GCCATCAACC GTTCTGTGCG TGGCTTGCCC GATGATTTTG GCGGCGATGA TATACGTACG
GATTTTAATG TTGCGCCCAA CGAAACTTAT GGAACGAAAG TAAGTGTAGG GATCAGGTTT
TTTGATGCGA AAGTAGATAA ACTGGTACGG GCTAATTTAG GTGTAAATGC GAACATATTT
TACAATACCT ATAATGGAAT CGGAATCAGT GCCGGAATCA ATCCATCAAT TTCTTCAGGA
TCCGGTACAA AAGACGGTCT TGTTGGAAAT TTAGGTGTTT CGTTACAGGC GGGATCTGAA
TCAGGACTTG ATATTTCACC CACATTAGGA ATAAGCAACA CAGAAGATAA CGGCAAAAAA
GAACAGGGCT TGAATGCATC CATTGGTTTC CCGTTCAACA CCCGCGAAGG GTTAAAAGGC
ATGACGATTT CTGCCGGTTA CAGTCCAAGT TCAAAATCAA GTTTGTACGG TACTAATTTT
GGAGGCAATG CTTTTCAGGG ATTTTCGACA CCAACCTATA CACCAACGAT ACAGCAAAGT
CACCGGAATT TAAGCATAGG TACCAACTTT GCGATTCAAT TTTCTAATCC GGTATCTGAA
CTGGGGAACC TGGGTTTTGA AGGTTATTAC AACGGACAAT TTTTAAAAAA TACAACTACG
CACAATCCTG CCTATGGGTA TATGTATTCC AGCGCAGGAA GTTCGGACTT GAAACTCTAT
GATATAAACA GAGAAAAAGA TGGTGCCTAT CACAAAAAGT ATACACAGAA TTTACCCGTC
ACAAATTATA CATACGACAT TTTTAGTGTC AGCGGCCAGG GTGTCAGCGG AACCTATCGT
TTACACCGCG GAGATTTTGG TATTGTTTCA GATCCGGTTG CCAAAGACGA ATCCATAGCA
CCTGCCGGCG GCGTGTCACT TGGATTAGGA GCGAACTCGA TTGATGTCGG AGTGAACGGC
GCCTACTATA AAACCAATGC AATCTCAGGT AAATGGACAG GTGATAATGG GAATTTTCCA
GTATTTAATT CAGAAACCAA TCTGAATAAC GCAACCAAAG AAGTTGTATA TTTTAAAAAA
ATGGGCGAAT CAACGGTTGA AAATGATCTG GTATTTTTAA ACGATGTTCA GAAATCAACT
GATTTACTGC AATACAATCT GGCCTCATCT GTTTATGGGA TTCCTACCAA TACCTATGCG
AATGCTTCAG CTGTAAAGCA GGTAAACAGC AGAAGCAGCA GACCAAACAA AACTTCAGCT
TTTACAACAC TAACCGCTGC TGAAGCTTCA AGAGGTGCTG TATTACCGAT TCAGAATTAT
GTAATGAATA CGTTTGACTG GATTGATGGC CGCAGCGAAG CAGATAAAAA ATTAAATACC
TCCAATAAGA ATATTGGCTA TGTAAAGGAT ACCTTAAAAC GTATTGATAA TTTACGAAAA
GCCCATCACA TTTCAGAAGT GCGTGTGACC GATCAATCCG GATCCCGCTA TGTATATGGG
ATTCCGGCAT ATAACATCAG CCAGCAGGAA ATTACTTTTG CGGTAAATTC TGGCTCAGCG
GCTACTAAAA ATGCAGCAGT TAATTCAGGA CTTGTAAGCT ATCAAAGCAG CGATTTAGGA
AACAACAACC GTAACGGGCT TGATAATTAT TATAATAATA TTTCAACTCC TGCCAATGCA
CATTCCTATC TGCTTACCTG TATATTATCT TCGGATTATG TAGACAGCGA TAATATTCCG
GGCCCCTCTA ACGGAGATTT GGGTACCTAC ACAAAATTTA ATTATTCTAA ACTTCCTGTT
AATTTCTTAT GGCGCACACC GATGTCAGAA AGCGAACGTA TTGCAAGTTT CAGTGAAGGC
ATGAAAGGAG ATAACCTGGA TGATAAAGGA AATATTATTT ACGGTGAAAA AGAAGTATGG
TATCTGCATT CGATTGAGAC ACCCACACAC GTGGCTGAAT TTCATCTGAG TCCACGTCTG
GATGGCTTTG GCGCAGAAGG TCTGGATGGG AAAATCGGAA ATACCGCGCT GATGAAGCTG
GATAAAATTG TTTTATATGC AAAAGCAGAT AAGCTGAACT CAAGTGCAGA GCCCATTAAA
ACAGTATACT TCAGCTATAG CTATAAACTT TGTCCGGGTA CAGTAAACAG TAAATTTGAT
GCAGCATTAA ATCCGGCAAA AGGAAAATTA ACGCTTGAAA AAGTATGGTT CACCTATGGC
GGTTCTAAAA AAGGAGTATT GAATCCATAT GTATTTACAT ACGCAGATCA GGATTTTGAT
GGTAACATGG ATGCTGCATT GAATCCATCT TATTCACATC TGAATTACGA TCGCTGGGGT
ACGTATAAAT TCAATAATCT GCCGGGTAAC AGTGAGAATA AATTACCCAA TGGTGTATTC
CCGTATACCG ATCAGCAGAA TAAAAGTGCT GTTGATAATA ATGCCGCCGT ATATGCCTTG
TCAACAATTC AGATGCCAAC AGCAGGTACC ATGCATGTAG TATACGAATC GGATGATTAT
GCTTATGTGC AGGATAAAAA AGCCATGCGT ATGTATACCA TTGCAGATGA ATCAGATGTT
TTGTTTACAA ATGCATTTGA TCAGAAAAAC TTTATCACAA TAAATCTGGG TGAAGGATTT
ATTCCGAAAA CATCGAACCG TAACCAGGAG TTTCAGGATC TGTATATAGG TGCTACGGAG
CTGATGTATT TTAAAGTATT GATGAATGTA ATCAATCCGT CCATTACCAC AAGCAAAGCA
CGAACGGAGT ATGTGCCAGG CTATGCCGAA ATTGATAAGG GAAGCTGCAC ACTCGATGAA
AGTAGTCTGC AGGGTAATAA ATACACGAAA GCTAAAATCG TATTTCAGAA AGTTAAATCC
GGAGGGGTCG TTGTAAATCC TATTTCACGG GCTGGATGGA TGTTCGCTAA ATTAAATCTG
GGCAGAGAAT TAAAAGGGTT AGGCAATGCC AAAGATGCCG GCATGGAAAC CATCATGCTT
GCACTGATCT CCCAGATCTC AAGCGTGGCA ACTGTTTTCG CCGGCTATAC ATCTGAAATG
ATTGCCAAGC AGCATTCCAA TCAGATCGTT CCCAAGGAGT CGTACGTGAA ATTGTTAGAA
CCCGATCAGA TCAAACTTGG CGGCGGTCAT CGGGTGAAAG CCATTATTAT GTCTGATAGC
TGGGCATTGA TGAAATCTGT AAAAGAGAAT CAGCAACCGG GTCTGGTAAA ACAAACATCC
TATTACGGGC AAACATACAG CTATACAAAA AACGAAAATA ACAGAACAAT AAGCTCCGGT
GTTGCAGCAT ATGAACCGAT CATGGGAGGA GATGAAAACC CATTCCGTAA ACCTGTATTT
GTTGAAGAAA AAATTCCGCT GGCTGCCAAC AATACCCATT TCCTGGAAGA ACCTTTTGGT
GAATGCTTTT TCCCGGCGCC AACTGTGGGG TACAGCAAGG TTGTTGTTAC ACCGGTTAAA
CTGACGGTTG CAAACATTCA GAATAAAAAT TATACCGTAG GTAATGGTAC TGGCCGGGTA
GAGCAGGAGT TCTATACAGC TAAAGATTTC CCGACCTACA CTGAGCGTAC CAAGATTATT
AAAGCCGGGT TGAATCCGAA TATGATTTCC AAATTCATGC GGTTTGCATC TACAGATTTA
GCTACCTGCA CACAAGGATA TTACATTGAA ACAAACGATA TGCACGGCAA ACCAAAATCC
AAACGTGTGT ATCCTGAAAT TCCTGTCAAT TCTCAGGAGA CAAATCCACA GCCCATTTCA
GAGGTTGAAT ATAAATACAA AACGTTGGGC GGTAAATTAG ATAATCAGGT TAAAACCATA
AATCCGGATC TCACAATTCC TGCTGCAACA AGTACTTTAG GTGTTGATGT TGATGTAGTG
AATGACCAGC GCGAATCTAC TTCTACAACA GAAGGAGGCG GGTTTAGCGG CCATTTAAAA
ACAATCGTAA TCTTTATTCC TTTGCCAGTT CCTACGGGCT TCCCGGATGT TGGGGATGAA
CTTGTTCAGT TCCGTTCTGT TGTTACAACC AAGGTTGCCA ACAGGTATGG TATACTGGAG
GAGACCATTG CAAAAGATAA CGGCGCAAGT ATTTCAACGA AGAACCTTGC CTGGGATGCA
AAAACAGGAG AAGTGATTTT AACTTCCTTG CAAAATGAAT TTCACGATCC GATCTACACC
TTTAATTATC CTGCACACTG GGCATATACG CGTATGAGCC ATGCAAGTGA AACAGAAGGA
ATGAGTTTTT CAAAAAACTA TTTTGATACA CACACAGGCT TATTTAAAGA TGGAGATGAA
TTGATTCTTG ATACGGGCAT AAAAGCGTTT GTTAATAAAC CGGATATGTC AACGGTGCAG
GTTATTAATA AGAATGGTGT TCCTGTAAGC TTTGCACGTG CCAAAGTAAT CCGGTCAGGA
GCACGTAATA TGCCTTCGGC ACCCATTGGT ACGGTTGTGA CATTAACCAA TCCGATGCAG
GGTAATGTAG TTGAATTCAA TAATGTTATT AACGCGGGTG CATCGGAATA CAAAGAGACA
TGGAAACGTA TGGGCTGCGA CTGTGAAGAT GCAACTAAAA GTACCAATCC CTATATAACC
GGCGTAAAAG GAAACCTGCG TCCGTACAGA TCATGGACGT ATTTAACCGA CCGCTACCAG
CGTTTGGTGA ATAACCAGAT GAACATCCGT ACAGACGGAT TTTATAAAGA TTTTGCTACG
TTCTGGCAAT ACAAACAAAA CGGTTTATTG GGTTTACCCG ATAATGTTGC TGCAACCAAA
TGGCAGTATG TAACAGAGAT TACAAATTAC AATCCACTAG GGCTTGAAAT TGAAAATAAA
GATGCGCTTG GCCGTTATTT AATGGCACAA TATGGCTATG GGCGTAAGCT TCCCGTTGCT
ACATCAAATA ATTCTCAGTA CAGAGAATCG GGTTTCGATG GTTTTGAGGA TTACGATTAC
GGAGATTGTA TTGATGATCA CTTCAGCTGG AGAAATGCAA AAACAAGTGT GACCGAAGCG
GAAGCGCACA CCGGACGTAA GTCTATCAAA GTTGGTTCAG GCCAGAAGCT GGAAATAAAG
AAAGTGATTT TACCTTGCGA ATAA
|
|---|
| Protein sequence | MFLRLAKHQR IIASFLLINF LTFFIPIQSK ALSSGPSQPE TQQFAPAGMD DMVDPFTGDF
SYNIPLMDVG GYPINLNYAS GITPDAEASW TGLGWNLNVG AINRSVRGLP DDFGGDDIRT
DFNVAPNETY GTKVSVGIRF FDAKVDKLVR ANLGVNANIF YNTYNGIGIS AGINPSISSG
SGTKDGLVGN LGVSLQAGSE SGLDISPTLG ISNTEDNGKK EQGLNASIGF PFNTREGLKG
MTISAGYSPS SKSSLYGTNF GGNAFQGFST PTYTPTIQQS HRNLSIGTNF AIQFSNPVSE
LGNLGFEGYY NGQFLKNTTT HNPAYGYMYS SAGSSDLKLY DINREKDGAY HKKYTQNLPV
TNYTYDIFSV SGQGVSGTYR LHRGDFGIVS DPVAKDESIA PAGGVSLGLG ANSIDVGVNG
AYYKTNAISG KWTGDNGNFP VFNSETNLNN ATKEVVYFKK MGESTVENDL VFLNDVQKST
DLLQYNLASS VYGIPTNTYA NASAVKQVNS RSSRPNKTSA FTTLTAAEAS RGAVLPIQNY
VMNTFDWIDG RSEADKKLNT SNKNIGYVKD TLKRIDNLRK AHHISEVRVT DQSGSRYVYG
IPAYNISQQE ITFAVNSGSA ATKNAAVNSG LVSYQSSDLG NNNRNGLDNY YNNISTPANA
HSYLLTCILS SDYVDSDNIP GPSNGDLGTY TKFNYSKLPV NFLWRTPMSE SERIASFSEG
MKGDNLDDKG NIIYGEKEVW YLHSIETPTH VAEFHLSPRL DGFGAEGLDG KIGNTALMKL
DKIVLYAKAD KLNSSAEPIK TVYFSYSYKL CPGTVNSKFD AALNPAKGKL TLEKVWFTYG
GSKKGVLNPY VFTYADQDFD GNMDAALNPS YSHLNYDRWG TYKFNNLPGN SENKLPNGVF
PYTDQQNKSA VDNNAAVYAL STIQMPTAGT MHVVYESDDY AYVQDKKAMR MYTIADESDV
LFTNAFDQKN FITINLGEGF IPKTSNRNQE FQDLYIGATE LMYFKVLMNV INPSITTSKA
RTEYVPGYAE IDKGSCTLDE SSLQGNKYTK AKIVFQKVKS GGVVVNPISR AGWMFAKLNL
GRELKGLGNA KDAGMETIML ALISQISSVA TVFAGYTSEM IAKQHSNQIV PKESYVKLLE
PDQIKLGGGH RVKAIIMSDS WALMKSVKEN QQPGLVKQTS YYGQTYSYTK NENNRTISSG
VAAYEPIMGG DENPFRKPVF VEEKIPLAAN NTHFLEEPFG ECFFPAPTVG YSKVVVTPVK
LTVANIQNKN YTVGNGTGRV EQEFYTAKDF PTYTERTKII KAGLNPNMIS KFMRFASTDL
ATCTQGYYIE TNDMHGKPKS KRVYPEIPVN SQETNPQPIS EVEYKYKTLG GKLDNQVKTI
NPDLTIPAAT STLGVDVDVV NDQRESTSTT EGGGFSGHLK TIVIFIPLPV PTGFPDVGDE
LVQFRSVVTT KVANRYGILE ETIAKDNGAS ISTKNLAWDA KTGEVILTSL QNEFHDPIYT
FNYPAHWAYT RMSHASETEG MSFSKNYFDT HTGLFKDGDE LILDTGIKAF VNKPDMSTVQ
VINKNGVPVS FARAKVIRSG ARNMPSAPIG TVVTLTNPMQ GNVVEFNNVI NAGASEYKET
WKRMGCDCED ATKSTNPYIT GVKGNLRPYR SWTYLTDRYQ RLVNNQMNIR TDGFYKDFAT
FWQYKQNGLL GLPDNVAATK WQYVTEITNY NPLGLEIENK DALGRYLMAQ YGYGRKLPVA
TSNNSQYRES GFDGFEDYDY GDCIDDHFSW RNAKTSVTEA EAHTGRKSIK VGSGQKLEIK
KVILPCE
|
|---|
| |