Gene CHU_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1516 
Symbol 
ID4183994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1750527 
End bp1751579 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content35% 
IMG OID638071509 
Productarsenite efflux transporter 
Protein accessionYP_678127 
Protein GI110637920 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0798] Arsenite efflux pump ACR3 and related permeases 
TIGRFAM ID[TIGR00832] arsenical-resistance protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.407136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.404037 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACT CTAATCCTGC ACAACGAAAG AAATTAGGTT TCTTAGATCG TTACTTGACG 
TTATGGATTT TCCTAGCAAT GGCAATAGGA GTAGGGATAG GATATTTTAT ACCTAATACT
CCATCATTGA TAAACTCTTT TCAATCTGGC ACAACAAATA TTCCTATTGC AATAGGATTA
ATTGTTATGA TGTATCCTCC CTTGGCGAAA GTAAAATATG AAGAGATTGA TAATATATTC
GACAATGTAA AAGTATTGTC GTTGTCTCTT TTTATAAACT GGATTGTTGG ACCTTTATTA
ATGTTTGTAC TTGCTATTAC GTTTCTCTCG GATTATCCGG AGTATATGGT AGGTTTAATA
TTAATCGGTA TTGCCCGATG CATTGCCATG GTTATTGTTT GGAATGAGCT GGCTGATGGA
AATAGAGAAT ATGCAGCAGG TTTGGTTGCA TTGAATAGTA TCTTTCAGGT ACTGTTTTAT
AGTGTGTTGG CATGGCTTTA TATTACAGTA CTTCCGCCAT ATTTCGGCAT AAAGGGAATT
GAAATTAATA TTGGTTTTCT GGAAATTGCA GTGAGCGTAT TTATCTATCT CGGAAATCCT
TTATTAGCAG GATTTGTTTC CAGATATGTA TTGATAAAAG TAAAAGGAAA AGACTGGTAC
GAACAAAAAT ATCTTCCGTT CATAAGTACG ATTACCTTAA TTGCATTATT ATTTACAATT
GTAGTTATGT TTAGTTTGAA AGGAGAGTTG ATTGTCCAGC TACCAATGGA TGTTTTAAGG
ATTGCTATTC CTTTAACGAT TTATTTTGCT CTAATGTTTA TTGGAACATT TATAGCTGGG
AAGTACATTG GTGCCGATTA TTCTAAAAAT GTAGCACTTT CATTTACCGC AGCCGGAAAT
AACTTTGAAC TGGCTATTGC CGTTGCTATC GCTATTTTTG GAATAAATTC AGGGCCGGCA
TTTACAGGAG TGATTGGGCC GTTGGTTGAA GTGCCAGCTT TGATATTGTT AGTGAAGGTG
GCATTTTGGC TAAAGAAAAA ATTATATAGA TAA
 
Protein sequence
MNNSNPAQRK KLGFLDRYLT LWIFLAMAIG VGIGYFIPNT PSLINSFQSG TTNIPIAIGL 
IVMMYPPLAK VKYEEIDNIF DNVKVLSLSL FINWIVGPLL MFVLAITFLS DYPEYMVGLI
LIGIARCIAM VIVWNELADG NREYAAGLVA LNSIFQVLFY SVLAWLYITV LPPYFGIKGI
EINIGFLEIA VSVFIYLGNP LLAGFVSRYV LIKVKGKDWY EQKYLPFIST ITLIALLFTI
VVMFSLKGEL IVQLPMDVLR IAIPLTIYFA LMFIGTFIAG KYIGADYSKN VALSFTAAGN
NFELAIAVAI AIFGINSGPA FTGVIGPLVE VPALILLVKV AFWLKKKLYR