| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1511 |
|---|
| Symbol | yegM |
|---|
| ID | 4183989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 1742369 |
|---|
| End bp | 1743637 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638071504 |
|---|
| Product | membrane-fusion protein |
|---|
| Protein accession | YP_678122 |
|---|
| Protein GI | 110637915 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000121317 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.228585 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA CACTATATAA AATCGTAATT ATCATTGCAG CCAGCTGCAT ACTTTATTCC
TGCGGAAACA AGTCAGAAAA AGCAGTTGAA GAACATCATG AAGAAGAGGA AGGAAAAGTA
GAATTAAACA ATGCACAATT TAAAAGTGCA GGGATTGAGT TTGGTAAAGT AGAACTAAAA
AATATTAGTT CCACCATTTC TGTTAATGGG GTATTGGATG TCCCTCCTCA AAACATGGTA
TCTTTATCGG CACTTATGGG AGGATTTATA AAATCTACCA TTCTATTACA AGGCATGCGT
GTAAAAAAAG GCCAGGTAAT TGCTACGATT CAGAATACAG ACTTCATACA AATTCAAACT
GAATATTTAG AGAATATTCA AAAATTGAAA TTTTTAGAGT TAGAATATAA AAGACAGGAA
GAACTTTCAA AAGAAAATGT AGCCTCAGCC AAAATTTTCC AACAAGCAAG CTCAGACTAT
AACAGTTTGC AAGCCACTAT TGGAGGTTTG GAAGAAAAAT TAAAGATTTT AAATATTGAT
CCTACAACTT TAACTAAATC TACAATCAGA AGTATCGTAA ATATTTATTC TCCAATAAAT
GGATACGTAA CAACAGTAAA TATAAACATT GGCAGGTTTG TAAATCCACA AGACGTCATT
TGTGAGATAG TCGACACAGA ACACTTACAT GCTGAGCTAA CTGTGTTTGA AAAAGACATT
TCAAAAATAA AAATTGGACA GAAACTTAGA TTCGTTCTTG TCAATGAAAG TGGCAAAGAA
CGTACAGCAT CCATATATTT AATCAATCAT CAAATTTCTC CTGAAAGAAC CATACGTGTG
CATGCGCACA TTGACACGGA AGATCCGAAC CTAATGCCAA ACATGTATCT AAAAGCATTA
ATAGAGATTG GTGAAGGTAA TAAAACAACT GCGCTACCTG AGAAAGCTAT AGTAAATGTT
GGAGATAAAT TCTATATCTT CATAAAAGAT GATGGCCATA GCCATGAACA CACAGAAACA
AAACATGAAG AGGGTACAGA AACTCATGCA GAAGGCGAAG AAAAACATTC AGCAACTGAA
GAGGTAAAAC ATGAAGAAGA GCAAGCTTTT AAAGCCATTG AAATACAAAA AGGTATTACT
CAGAATGGCT ATACAGAAGT AATACTCCCA GAGGGTTTTG AAATAGATCA TGCTAAAGTA
GTTATAAACG GTGCTTATGC GCTGCTTTCA AAAATGAACA ATTCAGAAGA AGAAGGTCAC
GCTCATTAA
|
|---|
| Protein sequence | MKKTLYKIVI IIAASCILYS CGNKSEKAVE EHHEEEEGKV ELNNAQFKSA GIEFGKVELK
NISSTISVNG VLDVPPQNMV SLSALMGGFI KSTILLQGMR VKKGQVIATI QNTDFIQIQT
EYLENIQKLK FLELEYKRQE ELSKENVASA KIFQQASSDY NSLQATIGGL EEKLKILNID
PTTLTKSTIR SIVNIYSPIN GYVTTVNINI GRFVNPQDVI CEIVDTEHLH AELTVFEKDI
SKIKIGQKLR FVLVNESGKE RTASIYLINH QISPERTIRV HAHIDTEDPN LMPNMYLKAL
IEIGEGNKTT ALPEKAIVNV GDKFYIFIKD DGHSHEHTET KHEEGTETHA EGEEKHSATE
EVKHEEEQAF KAIEIQKGIT QNGYTEVILP EGFEIDHAKV VINGAYALLS KMNNSEEEGH
AH
|
|---|
| |